CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Snai3 *(Rattus norvegicus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSRNOG00000013586	T108983_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SNAI3 M04607_2.00	Homo sapiens	YRCACCTGYH	DRCAGGTGYR	SELEX Yin et al.(2017) SNAI3_FL_HT-SELEX	0.781	0.858
SNAI3 M04608_2.00	Homo sapiens	YVCACCTGYH	DRCAGGTGBR	SELEX Yin et al.(2017) SNAI3_FL_Methyl-HT-SELEX	0.781	0.858
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Rattus norvegicus* TFs

17 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Snai3	Mus musculus	ENSMUSG00000006587	I	0.803
SNAI3	Ochotona princeps	ENSOPRG00000015227	I	0.787
SNAI3	Oryctolagus cuniculus	ENSOCUG00000014852	I	0.783
SNAI3	Gorilla gorilla	ENSGGOG00000012559	I	0.781
SNAI3	Homo sapiens	ENSG00000185669	D	0.781
SNAI3	Pan troglodytes	ENSPTRG00000008460	I	0.781
ENSPPYG00000007643	Pongo abelii	ENSPPYG00000007643	I	0.779
ENSSTOG00000021205	Ictidomys tridecemlineatus	ENSSTOG00000021205	I	0.778
ENSNLEG00000000595	Nomascus leucogenys	ENSNLEG00000000595	I	0.771
Snai3	Dipodomys ordii	ENSDORG00000011547	I	0.766
SNAI3	Loxodonta africana	ENSLAFG00000005117	I	0.763
ENSP00000327968	Macaca fascicularis	ENSP00000327968	I	0.762
ENSCSAG00000003047	Chlorocebus sabaeus	ENSCSAG00000003047	I	0.762
ENSPANG00000000509	Papio anubis	ENSPANG00000000509	I	0.762
SNAI3	Otolemur garnettii	ENSOGAG00000000419	I	0.762
SNAI3	Macaca mulatta	ENSMMUG00000008716	I	0.762
SNAI3	Callithrix jacchus	ENSCJAG00000012922	I	0.760