CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hic1l
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000013139
T112408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.819
0.948
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.789
0.852
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.789
0.852
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.789
0.852
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.789
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000033426
C2H2 ZF
310
332
YVCIPCGKGFPSSEQLNAHVETH
ENSTRUP00000033426
C2H2 ZF
368
390
FKCTVCSKSYKDPATLRQHEKSH
ENSTRUP00000033426
C2H2 ZF
396
418
FPCNICGKMFTQRGTMTRHMRSH
ENSTRUP00000033426
C2H2 ZF
424
446
FACEECGMRFTRQYRLTEHMRVH
ENSTRUP00000033426
C2H2 ZF
452
474
YECQLCGGKFTQQRNLISHLRMH
ENSTRUP00000033427
C2H2 ZF
420
442
YVCIPCGKGFPSSEQLNAHVETH
ENSTRUP00000033427
C2H2 ZF
484
506
FKCTVCSKSYKDPATLRQHEKSH
ENSTRUP00000033427
C2H2 ZF
512
534
FPCNICGKMFTQRGTMTRHMRSH
ENSTRUP00000033427
C2H2 ZF
540
562
FACEECGMRFTRQYRLTEHMRVH
ENSTRUP00000033427
C2H2 ZF
568
590
YECQLCGGKFTQQRNLISHLRMH
ENSTRUP00000033428
C2H2 ZF
417
439
YVCIPCGKGFPSSEQLNAHVETH
ENSTRUP00000033428
C2H2 ZF
481
503
FKCTVCSKSYKDPATLRQHEKSH
ENSTRUP00000033428
C2H2 ZF
509
531
FPCNICGKMFTQRGTMTRHMRSH
ENSTRUP00000033428
C2H2 ZF
537
559
FACEECGMRFTRQYRLTEHMRVH
ENSTRUP00000033428
C2H2 ZF
565
587
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy