LotgiG119241 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG119241 T121619_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.786 0.904
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.786 0.904
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.786 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP119241 C2H2 ZF 1 26
LotgiP119241 C2H2 ZF 34 61
LotgiP119241 C2H2 ZF 67 91
LotgiP119241 C2H2 ZF 97 122
LotgiP119241 C2H2 ZF 128 153

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_01736 Arthroderma benhamiae ARB_01736 N 0.000
H102_08828 Trichophyton rubrum H102_08828 N 0.000
H105_08853 Trichophyton soudanense H105_08853 N 0.000
PODANS_1_19300 Podospora anserina PODANS_1_19300 N 0.000
SPBR_01429 Sporothrix brasiliensis SPBR_01429 N 0.000
TRV_03430 Trichophyton verrucosum TRV_03430 N 0.000