CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG119241
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG119241
T121619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.786
0.904
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.786
0.904
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.786
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP119241
C2H2 ZF
1
26
TNCHWVDCSQEYSTQDELVKHINQDH
LotgiP119241
C2H2 ZF
34
61
FVCRWIDCSREEKPFKAQYMLVVHMRRH
LotgiP119241
C2H2 ZF
67
91
HRCTFEGCNKAYSRLENLKTHLRSH
LotgiP119241
C2H2 ZF
97
122
YMCEFPGCSKAFSNASDRAKHQNRTH
LotgiP119241
C2H2 ZF
128
153
YVCKAAGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LCUP015520
Lucilia cuprina
LCUP015520
I
0.798
ASIS001386
Anopheles sinensis
ASIS001386
I
0.798
AAEL012039
Aedes aegypti
AAEL012039
I
0.798
ACUA017715
Anopheles culicifacies
ACUA017715
I
0.796
ACHR002736
Anopheles christyi
ACHR002736
I
0.796
AALB008266
Anopheles albimanus
AALB008266
I
0.796
ADIR005874
Anopheles dirus
ADIR005874
I
0.796
AATE009625
Anopheles atroparvus
AATE009625
I
0.796
AFUN004511
Anopheles funestus
AFUN004511
I
0.796
ASTEI06951
Anopheles stephensi
ASTEI06951
I
0.796
AMIN000086
Anopheles minimus
AMIN000086
I
0.796
AMAM007692
Anopheles maculatus
AMAM007692
I
0.796
CpipJ_CPIJ000614
Culex pipiens
CpipJ_CPIJ000614
I
0.796
AFAF006125
Anopheles farauti
AFAF006125
I
0.796
TC003000
Tribolium castaneum
TC003000
I
0.796
CPIJ000614
Culex quinquefasciatus
CPIJ000614
I
0.796
AGAP004637
Anopheles gambiae
AGAP004637
I
0.796
ADAC002075
Anopheles darlingi
ADAC002075
I
0.796
GL18388
Drosophila persimilis
FBgn0155989
I
0.794
GA27838
Drosophila pseudoobscura
FBgn0249202
I
0.794
ci
Drosophila yakuba
FBgn0022826
I
0.786
ci
Drosophila melanogaster
FBgn0004859
D
0.786
GH23992
Drosophila grimshawi
FBgn0131449
I
0.786
ci
Drosophila simulans
FBgn0012866
I
0.786
GG16466
Drosophila erecta
FBgn0108697
I
0.786
GM23237
Drosophila sechellia
FBgn0178104
I
0.786
GJ14655
Drosophila virilis
FBgn0201862
I
0.784
GK13666
Drosophila willistoni
FBgn0215674
I
0.784
GI14119
Drosophila mojavensis
FBgn0136873
I
0.777
HmN_000840400
Hymenolepis microstoma
HmN_000840400
I
0.775
TsM_000018800
Taenia solium
TsM_000018800
I
0.773
EmuJ_000711000
Echinococcus multilocularis
EmuJ_000711000
I
0.773
B_00892
Schistosoma haematobium
B_00892
I
0.766
BGLB001304
Biomphalaria glabrata
BGLB001304
N
0.764
L798_06214
Zootermopsis nevadensis
L798_06214
I
0.762
ISCW005490
Ixodes scapularis
ISCW005490
I
0.759
Sjc_0091950
Schistosoma japonicum
Sjc_0091950
I
0.757