CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ISCW005490
(
Ixodes scapularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ISCW005490
T119927_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.757
0.896
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.757
0.896
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.757
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW005490-PA
C2H2 ZF
220
245
TNCHWRDCTREFPTQDDLVKHINNDH
ISCW005490-PA
C2H2 ZF
253
280
FVCHWKECSREEKPFKAQYMLVVHMRRH
ISCW005490-PA
C2H2 ZF
286
310
HKCTFEGCSKAYSRLENLKTHLRSH
ISCW005490-PA
C2H2 ZF
316
341
YMCEYPGCTKAFSNASDRAKHQNRTH
ISCW005490-PA
C2H2 ZF
347
372
YVCKAPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Ixodes scapularis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L798_06214
Zootermopsis nevadensis
L798_06214
I
0.820
DAPPUDRAFT_346973
Daphnia pulex
DAPPUDRAFT_346973
N
0.815
GB54885
Apis mellifera
GB54885
I
0.815
CGI_10022956
Crassostrea gigas
CGI_10022956
N
0.809
KGM_04065
Danaus plexippus
KGM_04065
I
0.809
BGIBMGA004545
Bombyx mori
BGIBMGA004545
I
0.809
BGLB001304
Biomphalaria glabrata
BGLB001304
N
0.805
PHUM413310
Pediculus humanus
PHUM413310
I
0.799
HMEL016327
Heliconius melpomene
HMEL016327
N
0.793
CPIJ000614
Culex quinquefasciatus
CPIJ000614
I
0.771
CpipJ_CPIJ000614
Culex pipiens
CpipJ_CPIJ000614
I
0.771
LCUP015520
Lucilia cuprina
LCUP015520
I
0.769
ASIS001386
Anopheles sinensis
ASIS001386
I
0.769
TC003000
Tribolium castaneum
TC003000
I
0.769
AAEL012039
Aedes aegypti
AAEL012039
I
0.769
AFAF006125
Anopheles farauti
AFAF006125
I
0.766
ADIR005874
Anopheles dirus
ADIR005874
I
0.766
ACUA017715
Anopheles culicifacies
ACUA017715
I
0.766
ACHR002736
Anopheles christyi
ACHR002736
I
0.766
AFUN004511
Anopheles funestus
AFUN004511
I
0.766
AMAM007692
Anopheles maculatus
AMAM007692
I
0.766
ADAC002075
Anopheles darlingi
ADAC002075
I
0.766
ASTEI06951
Anopheles stephensi
ASTEI06951
I
0.766
AMIN000086
Anopheles minimus
AMIN000086
I
0.766
AATE009625
Anopheles atroparvus
AATE009625
I
0.766
AALB008266
Anopheles albimanus
AALB008266
I
0.766
GL18388
Drosophila persimilis
FBgn0155989
I
0.766
AGAP004637
Anopheles gambiae
AGAP004637
I
0.766
GA27838
Drosophila pseudoobscura
FBgn0249202
I
0.766
LotgiG119241
Lottia gigantea
LotgiG119241
I
0.759
GK13666
Drosophila willistoni
FBgn0215674
I
0.759
ci
Drosophila melanogaster
FBgn0004859
D
0.757
GM23237
Drosophila sechellia
FBgn0178104
I
0.757
GH23992
Drosophila grimshawi
FBgn0131449
I
0.757
ci
Drosophila simulans
FBgn0012866
I
0.757
ci
Drosophila yakuba
FBgn0022826
I
0.757
GG16466
Drosophila erecta
FBgn0108697
I
0.757
GJ14655
Drosophila virilis
FBgn0201862
I
0.757