CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LotgiG130157
(
Lottia gigantea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LotgiG130157
T121652_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.777
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LotgiP130157
C2H2 ZF
159
185
FVCKLQCVLCRRGFNSKSNLRSHMRIH
LotgiP130157
C2H2 ZF
191
213
FVCKFCDRRFSQSSTLRNHIRLH
LotgiP130157
C2H2 ZF
219
243
YKCNICRSSYSQLAGLRAHQKSARH
Links
Other
C2H2 ZF
family TFs
Other
Lottia gigantea
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000006739
Pelodiscus sinensis
ENSPSIG00000006739
I
0.777
ENSPPYG00000019694
Pongo abelii
ENSPPYG00000019694
I
0.777
PRDM12
Pan troglodytes
ENSPTRG00000021475
I
0.777
PRDM12
Pteropus vampyrus
ENSPVAG00000001511
I
0.777
Prdm12
Rattus norvegicus
ENSRNOG00000009218
I
0.777
ENSPFOG00000019841
Poecilia formosa
ENSPFOG00000019841
I
0.777
ENSPANG00000025967
Papio anubis
ENSPANG00000025967
I
0.777
PRDM12
Otolemur garnettii
ENSOGAG00000007557
I
0.777
PRDM12
Ochotona princeps
ENSOPRG00000008680
I
0.777
prdm12b
Oryzias latipes
ENSORLG00000007114
I
0.777
ENSORLG00000017558
Oryzias latipes
ENSORLG00000017558
I
0.777
ENSSHAG00000015972
Sarcophilus harrisii
ENSSHAG00000015972
I
0.777
PRDM12
Sus scrofa
ENSSSCG00000005703
I
0.777
Ogr15453
Ophisaurus gracilis
Ogr15453
I
0.777
Pvit_04639
Pogona vitticeps
Pvit_04639
I
0.777
prdm12
Xenopus tropicalis
XB-GENE-953729
I
0.777
prdm12.L
Xenopus laevis
XB-GENE-953734
I
0.777
Alligator_sinensis_CCG011983.1
Alligator sinensis
Alligator_sinensis_CCG011983.1
I
0.777
ENSXMAG00000005537
Xiphophorus maculatus
ENSXMAG00000005537
I
0.777
ENSSTOG00000005986
Ictidomys tridecemlineatus
ENSSTOG00000005986
I
0.777
ENSTNIG00000005859
Tetraodon nigroviridis
ENSTNIG00000005859
I
0.777
ENSTRUG00000013239
Takifugu rubripes
ENSTRUG00000013239
I
0.777
prdm12b
Takifugu rubripes
ENSTRUG00000018659
I
0.777
PRDM12
Oryctolagus cuniculus
ENSOCUG00000008241
I
0.777
ENSONIG00000002871
Oreochromis niloticus
ENSONIG00000002871
I
0.777
prdm12b
Danio rerio
ENSDARG00000007430
I
0.777
ENSCSAG00000014756
Chlorocebus sabaeus
ENSCSAG00000014756
I
0.777
PRDM12
Dasypus novemcinctus
ENSDNOG00000042302
I
0.777
ENSFALG00000001445
Ficedula albicollis
ENSFALG00000001445
I
0.777
ENSOANG00000001043
Ornithorhynchus anatinus
ENSOANG00000001043
I
0.777
PRDM12
Canis familiaris
ENSCAFG00000023076
I
0.777
PRDM12
Bos taurus
ENSBTAG00000023797
I
0.777
ENSAMEG00000016234
Ailuropoda melanoleuca
ENSAMEG00000016234
I
0.777
ENSAMXG00000007663
Astyanax mexicanus
ENSAMXG00000007663
I
0.777
ENSAMXG00000008540
Astyanax mexicanus
ENSAMXG00000008540
I
0.777
ENSAPLG00000012403
Anas platyrhynchos
ENSAPLG00000012403
I
0.777
prdm12b
Gasterosteus aculeatus
ENSGACG00000016713
I
0.777
PRDM12
Homo sapiens
ENSG00000130711
D
0.777
PRDM12
Gallus gallus
ENSGALG00000003895
I
0.777
PRDM12
Meleagris gallopavo
ENSMGAG00000005438
I
0.777
PRDM12
Microcebus murinus
ENSMICG00000015480
I
0.777
PRDM12
Monodelphis domestica
ENSMODG00000012108
I
0.777
Prdm12
Mus musculus
ENSMUSG00000079466
I
0.777
ENSMEUG00000003828
Macropus eugenii
ENSMEUG00000003828
I
0.777
ENSGMOG00000011797
Gadus morhua
ENSGMOG00000011797
I
0.777
ENSLACG00000017560
Latimeria chalumnae
ENSLACG00000017560
I
0.777
PRDM12
Loxodonta africana
ENSLAFG00000006979
I
0.777
ENSLOCG00000005429
Lepisosteus oculatus
ENSLOCG00000005429
I
0.777
Sakowv30035316m.g
Saccoglossus kowalevskii
Sakowv30035316m.g
I
0.773
NEMVEDRAFT_v1g119550
Nematostella vectensis
NEMVEDRAFT_v1g119550
I
0.763
Ocbimv22004421m.g
Octopus bimaculoides
Ocbimv22004421m.g
I
0.761
CGI_10016801
Crassostrea gigas
CGI_10016801
I
0.760
TriadG14897
Trichoplax adhaerens
TriadG14897
I
0.759