maker-pir_contig_583-fgenesh-gene-0.5 (Pythium irregulare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 maker-pir_contig_583-fgenesh-gene-0.5 T122576_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra84400
M01183_2.00 		Phytophthora ramorum
HRHCKYCGGM
KCCGRMGDYD		 PBM
Lambert et al.(2019)
pTH11169 		0.771 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000020546 C2H2 ZF 219 243
EPrPI00000020546 C2H2 ZF 249 271
EPrPI00000020546 C2H2 ZF 277 301
EPrPI00000020546 C2H2 ZF 307 331

Links

Other C2H2 ZF family TFs
Other Pythium irregulare TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-piw_contig_2368-snap-gene-0.2 Pythium iwayamai maker-piw_contig_2368-snap-gene-0.2 I 0.813
fgenesh_scip_prom.28083.941 Phytophthora lateralis fgenesh_scip_prom.28083.941 I 0.771
F443_04535 Phytophthora parasitica F443_04535 I 0.771
Phyra84400 Phytophthora ramorum Phyra84400 D 0.771
HpaG807312 Hyaloperonospora arabidopsidis HpaG807312 I 0.771
Physo138577 Phytophthora sojae Physo138577 I 0.762
estExt_Genewise1Plus.C_130008 Phytophthora capsici estExt_Genewise1Plus.C_130008 I 0.759
PITG_10525 Phytophthora infestans PITG_10525 I 0.759