CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Phyra77610
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra77610
T126282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra77610
C2H2 ZF
75
99
HVCETADCGKSFDSKWALIRHIRVH
Phyra77610
C2H2 ZF
105
129
FPCTYPSCDKSFAEKSAMTRHLQTH
Phyra77610
C2H2 ZF
135
159
YKCTYADCPKSFKGKDYLEFHLKIH
Phyra77610
C2H2 ZF
165
190
YACDHPTCSKTFCSPKSLKKHIRLWH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.11122
Phytophthora lateralis
fgenesh_scip_prom.28083.11122
N
0.827
F443_19094
Phytophthora parasitica
F443_19094
N
0.825
PITG_02480
Phytophthora infestans
PITG_02480
N
0.825
Physo128284
Phytophthora sojae
Physo128284
N
0.822
PYU1_G004510
Pythium ultimum
PYU1_G004510
N
0.816
snap_masked-pir_contig_42-abinit-gene-0.59
Pythium irregulare
snap_masked-pir_contig_42-abinit-gene-0.59
N
0.813
maker-pve_contig_417-snap-gene-0.20
Pythium vexans
maker-pve_contig_417-snap-gene-0.20
N
0.794
maker-piw_contig_198-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_198-snap-gene-0.25
N
0.782