POPTR_0015s10040 (Populus trichocarpa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 POPTR_0015s10040 T126844_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0015s10040.1 C2H2 ZF 1514 1537
POPTR_0015s10040.1 C2H2 ZF 1538 1561
POPTR_0015s10040.1 C2H2 ZF 1597 1623

Links

Other C2H2 ZF family TFs
Other Populus trichocarpa TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0486s0080 Salix purpurea SapurV1A.0486s0080 N 0.827
POPTR_0012s09390 Populus trichocarpa POPTR_0012s09390 N 0.781
30147.m013814 Ricinus communis 30147.m013814 N 0.781
cassava3225.m1 Manihot esculenta cassava3225.m1 N 0.777
Ca_08787 Cicer arietinum Ca_08787 N 0.768
Lus10043332.g Linum usitatissimum Lus10043332.g N 0.768
TCM_014549 Theobroma cacao TCM_014549 N 0.767
Cucsa.391680 Cucumis sativus Cucsa.391680 N 0.764
GLYMA04G36630 Glycine max GLYMA04G36630 N 0.764
Gorai.006G270100 Gossypium raimondii Gorai.006G270100 N 0.760
GLYMA06G18300 Glycine max GLYMA06G18300 N 0.757