cassava3225.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava3225.m1 T137861_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava3225.m1 C2H2 ZF 1658 1681
cassava3225.m1 C2H2 ZF 1682 1705
cassava3225.m1 C2H2 ZF 1741 1767

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m013814 Ricinus communis 30147.m013814 N 0.824
Lus10043332.g Linum usitatissimum Lus10043332.g N 0.811
cassava30243.valid.m1 Manihot esculenta cassava30243.valid.m1 N 0.794
POPTR_0012s09390 Populus trichocarpa POPTR_0012s09390 N 0.777
SapurV1A.0486s0080 Salix purpurea SapurV1A.0486s0080 N 0.777
POPTR_0015s10040 Populus trichocarpa POPTR_0015s10040 N 0.777
Ca_08787 Cicer arietinum Ca_08787 N 0.764
TCM_014549 Theobroma cacao TCM_014549 N 0.763
GLYMA04G36630 Glycine max GLYMA04G36630 N 0.760
Cucsa.391680 Cucumis sativus Cucsa.391680 N 0.760
Gorai.006G270100 Gossypium raimondii Gorai.006G270100 N 0.757