CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SU7_2211
(
Saccharomyces arboricola
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SU7_2211
T129870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN
NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.798
0.940
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB
VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.798
0.940
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH
DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.798
0.940
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN
NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.781
0.836
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.781
0.836
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH
DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.781
0.836
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJS42720
C2H2 ZF
587
611
FECLFPNCGKVFKRRYNIRSHIQTH
EJS42720
C2H2 ZF
617
641
YSCDFPGCTKAFVRNHDLIRHKISH
EJS42720
C2H2 ZF
646
666
YVCPCGKRFNREDALAVHRSR
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces arboricola
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy