CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014066.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG014066.1
T133314_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.815
0.989
ZNF148
M10239_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.815
0.989
ZNF148
M10240_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.815
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014066.1
C2H2 ZF
235
257
HVCEHCNAAFRTNYHLQRHVFIH
Alligator_sinensis_CCG014066.1
C2H2 ZF
263
285
FQCSQCDMRFIQKYLLQRHEKIH
Alligator_sinensis_CCG014066.1
C2H2 ZF
291
313
FHCDECGMRFIQKYHMERHKRTH
Alligator_sinensis_CCG014066.1
C2H2 ZF
319
342
YQCEYCLQYFSRTDRVLKHKRMCH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf148
Xenopus tropicalis
XB-GENE-996852
I
0.827
Zfp148
Rattus norvegicus
ENSRNOG00000001789
I
0.815
ZNF148
Sorex araneus
ENSSARG00000007257
I
0.815
ZNF148
Sus scrofa
ENSSSCG00000011858
I
0.815
ZNF148
Pteropus vampyrus
ENSPVAG00000006133
I
0.815
ENSSHAG00000013855
Sarcophilus harrisii
ENSSHAG00000013855
I
0.815
ENSPPYG00000013462
Pongo abelii
ENSPPYG00000013462
I
0.815
ENSNLEG00000000773
Nomascus leucogenys
ENSNLEG00000000773
I
0.815
ENSOARG00000020237
Ovis aries
ENSOARG00000020237
I
0.815
ZNF148
Otolemur garnettii
ENSOGAG00000013652
I
0.815
ENSSTOG00000027082
Ictidomys tridecemlineatus
ENSSTOG00000027082
I
0.815
ENSPSIG00000003614
Pelodiscus sinensis
ENSPSIG00000003614
I
0.815
ZNF148
Taeniopygia guttata
ENSTGUG00000004010
I
0.815
ENSP00000420448-D1
Bos grunniens
ENSP00000420448-D1
I
0.815
ENSP00000420448
Macaca fascicularis
ENSP00000420448
I
0.815
Gfo_R001184
Geospiza fortis
Gfo_R001184
I
0.815
Tal_R010256
Tyto alba
Tal_R010256
I
0.815
Cmyd_10009615
Chelonia mydas
Cmyd_10009615
I
0.815
Brh_R001493
Buceros rhinoceros
Brh_R001493
I
0.815
Zfp148
Mus musculus
ENSMUSG00000022811
I
0.815
ZNF148
Tursiops truncatus
ENSTTRG00000014714
I
0.815
Aan_R003668
Calypte anna
Aan_R003668
I
0.815
Afo_R008251
Aptenodytes forsteri
Afo_R008251
I
0.815
ZNF148
Tupaia belangeri
ENSTBEG00000008435
I
0.815
ENSPANG00000004284
Papio anubis
ENSPANG00000004284
I
0.815
ZNF148
Echinops telfairi
ENSETEG00000002856
I
0.815
ZNF148
Equus caballus
ENSECAG00000013557
I
0.815
ENSFALG00000013520
Ficedula albicollis
ENSFALG00000013520
I
0.815
ENSAPLG00000008859
Anas platyrhynchos
ENSAPLG00000008859
I
0.815
ZNF148
Felis catus
ENSFCAG00000026852
I
0.815
ZNF148
Bos taurus
ENSBTAG00000040031
I
0.815
ENSMPUG00000004162
Mustela putorius furo
ENSMPUG00000004162
I
0.815
ZNF148
Callithrix jacchus
ENSCJAG00000006741
I
0.815
ZNF148
Canis familiaris
ENSCAFG00000012574
I
0.815
ZNF148
Dasypus novemcinctus
ENSDNOG00000000280
I
0.815
ENSDORG00000003955
Dipodomys ordii
ENSDORG00000003955
I
0.815
ZNF148
Homo sapiens
ENSG00000163848
D
0.815
ZNF148
Gallus gallus
ENSGALG00000012049
I
0.815
ZNF148
Monodelphis domestica
ENSMODG00000018374
I
0.815
ENSAMEG00000004258
Ailuropoda melanoleuca
ENSAMEG00000004258
I
0.815
ZNF148
Loxodonta africana
ENSLAFG00000016025
I
0.815
ZNF148
Macaca mulatta
ENSMMUG00000001169
I
0.815
ENSONIG00000004240
Oreochromis niloticus
ENSONIG00000004240
I
0.810
ENSPFOG00000004115
Poecilia formosa
ENSPFOG00000004115
I
0.810
ENSLOCG00000002769
Lepisosteus oculatus
ENSLOCG00000002769
I
0.810
ENSLACG00000006364
Latimeria chalumnae
ENSLACG00000006364
I
0.803
ZNF148
Anolis carolinensis
ENSACAG00000010047
I
0.803
Pvit_03082
Pogona vitticeps
Pvit_03082
I
0.803
ENSAMXG00000006043
Astyanax mexicanus
ENSAMXG00000006043
I
0.801
znf148
Danio rerio
ENSDARG00000055106
I
0.798
znf148
Takifugu rubripes
ENSTRUG00000006270
I
0.798
znf148
Oryzias latipes
ENSORLG00000015950
I
0.798
Ogr00130
Ophisaurus gracilis
Ogr00130
I
0.762
ZNF148
Ochotona princeps
ENSOPRG00000010519
I
0.760
Pvit_14619
Pogona vitticeps
Pvit_14619
I
0.759
Tal_R010113
Tyto alba
Tal_R010113
I
0.759
ZNF281
Ornithorhynchus anatinus
ENSOANG00000004857
I
0.759
Gfo_R006633
Geospiza fortis
Gfo_R006633
I
0.759
ZNF281
Anolis carolinensis
ENSACAG00000006286
I
0.759
Brh_R005182
Buceros rhinoceros
Brh_R005182
I
0.759
Afo_R004007
Aptenodytes forsteri
Afo_R004007
I
0.759
Aan_R014758
Calypte anna
Aan_R014758
I
0.759
Cmyd_10021057
Chelonia mydas
Cmyd_10021057
I
0.759
ENSFALG00000014467
Ficedula albicollis
ENSFALG00000014467
I
0.759
ZNF281
Taeniopygia guttata
ENSTGUG00000004438
I
0.759
Alligator_sinensis_CCG011250.1
Alligator sinensis
Alligator_sinensis_CCG011250.1
I
0.759