Alligator_sinensis_CCG019865.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG019865.1 T133429_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF15
M04511_2.00 		Homo sapiens
VHCMCVCCCMYN
NRKGGGBGKGDB		 SELEX
Yin et al.(2017)
KLF15_eDBD_HT-SELEX 		0.820 0.942
KLF15
M04513_2.00 		Homo sapiens
VMCMCDCCCMCH
DGKGGGHGKGKB		 SELEX
Yin et al.(2017)
KLF15_FL_HT-SELEX 		0.820 0.942
KLF15
M08323_2.00 		Homo sapiens
SSCYNBCYCCDCCYC
GRGGHGGRGVNRGSS		 ChIP-seq
Schmitges et al.(2016)
Q9UIH9.MEME 		0.820 0.942
KLF15
M08907_2.00 		Homo sapiens
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_HUMAN.H11MO.0.A 		0.820 0.942
Klf15
M08987_2.00 		Mus musculus
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_MOUSE.H11MO.0.A 		0.820 0.942
KLF15
M10241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF15_Q2 		0.820 0.942
KLF15
M04512_2.00 		Homo sapiens
RCCMCGCCCMCH
DGKGGGCGKGGY		 SELEX
Yin et al.(2017)
KLF15_eDBD_Methyl-HT-SELEX 		0.820 0.942
KLF15
M04514_2.00 		Homo sapiens
GCCMCGCCCMCN
NGKGGGCGKGGC		 SELEX
Yin et al.(2017)
KLF15_FL_Methyl-HT-SELEX 		0.820 0.942
cbt
M03705_2.00 		Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH		 SELEX
Nitta et al.(2015)
cbt_1 		0.756 0.696
cbt
M03706_2.00 		Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY		 SELEX
Nitta et al.(2015)
cbt_2 		0.756 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG019865.1 C2H2 ZF 291 315
Alligator_sinensis_CCG019865.1 C2H2 ZF 321 345
Alligator_sinensis_CCG019865.1 C2H2 ZF 351 373

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000012971 Anas platyrhynchos ENSAPLG00000012971 I 0.823
Gfo_R014652 Geospiza fortis Gfo_R014652 I 0.823
Tal_R002960 Tyto alba Tal_R002960 I 0.823
ENSGALG00000006245 Gallus gallus ENSGALG00000006245 I 0.823
Brh_R002160 Buceros rhinoceros Brh_R002160 I 0.823
Pvit_11468 Pogona vitticeps Pvit_11468 I 0.823
KLF15 Meleagris gallopavo ENSMGAG00000007616 I 0.823
Afo_R011755 Aptenodytes forsteri Afo_R011755 I 0.823
ENSFALG00000012601 Ficedula albicollis ENSFALG00000012601 I 0.823
Cmyd_10013831 Chelonia mydas Cmyd_10013831 I 0.823
Aan_R004458 Calypte anna Aan_R004458 I 0.823
KLF15 Ornithorhynchus anatinus ENSOANG00000014825 I 0.820
ENSNLEG00000001047 Nomascus leucogenys ENSNLEG00000001047 I 0.820
ENSMPUG00000017390 Mustela putorius furo ENSMPUG00000017390 I 0.820
KLF15 Myotis lucifugus ENSMLUG00000010178 I 0.820
KLF15 Macaca mulatta ENSMMUG00000003721 I 0.820
KLF15 Otolemur garnettii ENSOGAG00000000703 I 0.820
Klf15 Mus musculus ENSMUSG00000030087 D 0.820
KLF15 Ochotona princeps ENSOPRG00000005237 I 0.820
ENSSHAG00000007635 Sarcophilus harrisii ENSSHAG00000007635 I 0.820
Klf15 Rattus norvegicus ENSRNOG00000017808 I 0.820
ENSP00000296233 Macaca fascicularis ENSP00000296233 I 0.820
klf15 Takifugu rubripes ENSTRUG00000014976 I 0.820
ENSXMAG00000007908 Xiphophorus maculatus ENSXMAG00000007908 I 0.820
KLF15 Tursiops truncatus ENSTTRG00000008498 I 0.820
KLF15 Pteropus vampyrus ENSPVAG00000004109 I 0.820
ENSPPYG00000013455 Pongo abelii ENSPPYG00000013455 I 0.820
klf15 Oryzias latipes ENSORLG00000001165 I 0.820
ENSONIG00000009164 Oreochromis niloticus ENSONIG00000009164 I 0.820
ENSPANG00000026096 Papio anubis ENSPANG00000026096 I 0.820
Ogr01993 Ophisaurus gracilis Ogr01993 I 0.820
ENSPFOG00000012815 Poecilia formosa ENSPFOG00000012815 I 0.820
ENSONIG00000003215 Oreochromis niloticus ENSONIG00000003215 I 0.820
ENSLOCG00000013716 Lepisosteus oculatus ENSLOCG00000013716 I 0.820
KLF15 Dasypus novemcinctus ENSDNOG00000036157 I 0.820
ENSDORG00000016283 Dipodomys ordii ENSDORG00000016283 I 0.820
KLF15 Equus caballus ENSECAG00000021092 I 0.820
klf15 Danio rerio ENSDARG00000091127 I 0.820
KLF15 Canis familiaris ENSCAFG00000003807 I 0.820
ENSCSAG00000008037 Chlorocebus sabaeus ENSCSAG00000008037 I 0.820
KLF15 Callithrix jacchus ENSCJAG00000006941 I 0.820
KLF15 Cavia porcellus ENSCPOG00000005315 I 0.820
ENSAMXG00000012874 Astyanax mexicanus ENSAMXG00000012874 I 0.820
KLF15 Homo sapiens ENSG00000163884 D 0.820
KLF15 Loxodonta africana ENSLAFG00000011970 I 0.820
ENSAMEG00000006403 Ailuropoda melanoleuca ENSAMEG00000006403 I 0.820
klf15 Gasterosteus aculeatus ENSGACG00000003717 I 0.820
ENSPFOG00000003698 Poecilia formosa ENSPFOG00000003698 I 0.816
klf15 Xenopus tropicalis XB-GENE-854149 I 0.816
ENSXMAG00000001323 Xiphophorus maculatus ENSXMAG00000001323 I 0.816
klf15.S Xenopus laevis XB-GENE-854150 I 0.816
KLF15 Procavia capensis ENSPCAG00000006301 I 0.816
ENSLACG00000013240 Latimeria chalumnae ENSLACG00000013240 I 0.816
ENSGMOG00000000921 Gadus morhua ENSGMOG00000000921 I 0.813
KLF15 Gasterosteus aculeatus ENSGACG00000011317 I 0.813
KLF15 Gorilla gorilla ENSGGOG00000009916 I 0.811
gw.37.333.1 Branchiostoma floridae gw.37.333.1 I 0.807
gw.442.76.1 Branchiostoma floridae gw.442.76.1 I 0.807
KLF15 Bos taurus ENSBTAG00000008313 I 0.804
KLF15 Takifugu rubripes ENSTRUG00000006529 I 0.800
ENSAMXG00000016240 Astyanax mexicanus ENSAMXG00000016240 I 0.800
ENSLOCG00000011807 Lepisosteus oculatus ENSLOCG00000011807 I 0.796
Ogr18174 Ophisaurus gracilis Ogr18174 I 0.794
klf15.2 Xenopus tropicalis XB-GENE-1018580 I 0.793
KLF15 Oryctolagus cuniculus ENSOCUG00000012493 I 0.793
Cmyd_10010595 Chelonia mydas Cmyd_10010595 I 0.790
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.790
Pvit_06090 Pogona vitticeps Pvit_06090 I 0.787
L798_11927 Zootermopsis nevadensis L798_11927 I 0.787
ENSLACG00000009512 Latimeria chalumnae ENSLACG00000009512 I 0.785
ENSPFOG00000002472 Poecilia formosa ENSPFOG00000002472 I 0.780
si:ch211-117k10.3 Tetraodon nigroviridis ENSTNIG00000007382 I 0.780
si:ch211-117k10.3 Oryzias latipes ENSORLG00000012237 I 0.780
si:ch211-117k10.3 Danio rerio ENSDARG00000090914 I 0.780
ENSAMXG00000003461 Astyanax mexicanus ENSAMXG00000003461 I 0.780
ENSXMAG00000013094 Xiphophorus maculatus ENSXMAG00000013094 I 0.780
si:ch211-117k10.3 Takifugu rubripes ENSTRUG00000000076 I 0.780
CapteG30437 Capitella teleta CapteG30437 I 0.779
ENSGMOG00000003751 Gadus morhua ENSGMOG00000003751 I 0.777
KLF15 Pan troglodytes ENSPTRG00000015329 I 0.776
CGI_10020309 Crassostrea gigas CGI_10020309 I 0.775
Ocbimv22012776m.g Octopus bimaculoides Ocbimv22012776m.g I 0.771
Sakowv30044439m.g Saccoglossus kowalevskii Sakowv30044439m.g I 0.771
SPU_015772 Strongylocentrotus purpuratus SPU_015772 I 0.771
DAPPUDRAFT_50068 Daphnia pulex DAPPUDRAFT_50068 I 0.771
Tal_R006156 Tyto alba Tal_R006156 I 0.768
ENSGALG00000021702 Gallus gallus ENSGALG00000021702 I 0.767
ENSMGAG00000003006 Meleagris gallopavo ENSMGAG00000003006 I 0.767
LotgiG100140 Lottia gigantea LotgiG100140 I 0.767
ISCW010690 Ixodes scapularis ISCW010690 N 0.762
Alligator_sinensis_CCG003669.1 Alligator sinensis Alligator_sinensis_CCG003669.1 I 0.761
Aqu1.224794 Amphimedon queenslandica Aqu1.224794 I 0.759
YQE_06283 Dendroctonus ponderosae YQE_06283 I 0.759
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.756
cbt Drosophila ananassae FBgn0101744 I 0.756
cbt Drosophila erecta FBgn0116778 I 0.756
cbt Drosophila melanogaster FBgn0043364 D 0.756
cbt Drosophila mojavensis FBgn0140770 I 0.756
cbt Drosophila grimshawi FBgn0117994 I 0.756
cbt Drosophila yakuba FBgn0233632 I 0.756
cbt Drosophila simulans FBgn0194348 I 0.756
cbt Drosophila sechellia FBgn0171577 I 0.756
cbt Drosophila virilis FBgn0206865 I 0.756