Pvit_03345 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_03345 T136960_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_03345 C2H2 ZF 334 356
Pvit_03345 C2H2 ZF 362 384
Pvit_03345 C2H2 ZF 560 582
Pvit_03345 C2H2 ZF 592 614
Pvit_03345 C2H2 ZF 975 997
Pvit_03345 C2H2 ZF 1003 1025

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SALL4 Anolis carolinensis ENSACAG00000012748 N 0.806
ENSPSIG00000009066 Pelodiscus sinensis ENSPSIG00000009066 N 0.817
ENSSHAG00000018013 Sarcophilus harrisii ENSSHAG00000018013 N 0.816
sall3a Takifugu rubripes ENSTRUG00000017423 N 0.813
ENSXMAG00000000798 Xiphophorus maculatus ENSXMAG00000000798 N 0.758
Alligator_sinensis_CCG001716.1 Alligator sinensis Alligator_sinensis_CCG001716.1 N 0.817
Cmyd_10017461 Chelonia mydas Cmyd_10017461 N 0.817
Gfo_R009587 Geospiza fortis Gfo_R009587 N 0.817
BAA85900 Xenopus laevis BAA85900 N 0.777
sall3.S Xenopus laevis XB-GENE-17340458 N 0.798
sall4 Xenopus tropicalis XB-GENE-485252 N 0.777
ENSPFOG00000013292 Poecilia formosa ENSPFOG00000013292 N 0.758
sall3b Oryzias latipes ENSORLG00000008882 N 0.775
ENSONIG00000013791 Oreochromis niloticus ENSONIG00000013791 N 0.803
ENSAMXG00000001254 Astyanax mexicanus ENSAMXG00000001254 N 0.799
ENSAMXG00000011111 Astyanax mexicanus ENSAMXG00000011111 N 0.811
ENSAPLG00000006498 Anas platyrhynchos ENSAPLG00000006498 N 0.817
ENSFALG00000013149 Ficedula albicollis ENSFALG00000013149 N 0.817
sall3b Gasterosteus aculeatus ENSGACG00000002533 N 0.800
ENSGALG00000007834 Gallus gallus ENSGALG00000007834 N 0.817
ENSGMOG00000013383 Gadus morhua ENSGMOG00000013383 N 0.779
ENSMEUG00000005793 Macropus eugenii ENSMEUG00000005793 N 0.788
SALL4 Monodelphis domestica ENSMODG00000016387 N 0.817
SALL4 Ornithorhynchus anatinus ENSOANG00000008667 N 0.781
sall4.L Xenopus laevis XB-GENE-485256 N 0.780