CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_03345
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_03345
T136960_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_03345
C2H2 ZF
334
356
HKCKFCGKVFGNDSALQIHLRSH
Pvit_03345
C2H2 ZF
362
384
YKCNICGNRFTTKGNLKVHFQRH
Pvit_03345
C2H2 ZF
560
582
FKCKICGRAFSTKGNLKTHYGVH
Pvit_03345
C2H2 ZF
592
614
HSCPICQKKFTNAVVLQQHIRMH
Pvit_03345
C2H2 ZF
975
997
HLCTTCGKNFSSASALQIHERTH
Pvit_03345
C2H2 ZF
1003
1025
FACSICGRAFTTKGNLKVHVGTH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG001716.1
Alligator sinensis
Alligator_sinensis_CCG001716.1
N
0.817
SALL4
Monodelphis domestica
ENSMODG00000016387
N
0.817
Cmyd_10017461
Chelonia mydas
Cmyd_10017461
N
0.817
ENSPSIG00000009066
Pelodiscus sinensis
ENSPSIG00000009066
N
0.817
ENSGALG00000007834
Gallus gallus
ENSGALG00000007834
N
0.817
Gfo_R009587
Geospiza fortis
Gfo_R009587
N
0.817
ENSFALG00000013149
Ficedula albicollis
ENSFALG00000013149
N
0.817
ENSAPLG00000006498
Anas platyrhynchos
ENSAPLG00000006498
N
0.817
ENSSHAG00000018013
Sarcophilus harrisii
ENSSHAG00000018013
N
0.816
sall3a
Takifugu rubripes
ENSTRUG00000017423
N
0.813
ENSAMXG00000011111
Astyanax mexicanus
ENSAMXG00000011111
N
0.811
SALL4
Anolis carolinensis
ENSACAG00000012748
N
0.806
ENSONIG00000013791
Oreochromis niloticus
ENSONIG00000013791
N
0.803
sall3b
Gasterosteus aculeatus
ENSGACG00000002533
N
0.800
ENSAMXG00000001254
Astyanax mexicanus
ENSAMXG00000001254
N
0.799
sall3.S
Xenopus laevis
XB-GENE-17340458
N
0.798
ENSMEUG00000005793
Macropus eugenii
ENSMEUG00000005793
N
0.788
SALL4
Ornithorhynchus anatinus
ENSOANG00000008667
N
0.781
sall4.L
Xenopus laevis
XB-GENE-485256
N
0.780
ENSGMOG00000013383
Gadus morhua
ENSGMOG00000013383
N
0.779
BAA85900
Xenopus laevis
BAA85900
N
0.777
sall4
Xenopus tropicalis
XB-GENE-485252
N
0.777
sall3b
Oryzias latipes
ENSORLG00000008882
N
0.775
ENSPFOG00000013292
Poecilia formosa
ENSPFOG00000013292
N
0.758
ENSXMAG00000000798
Xiphophorus maculatus
ENSXMAG00000000798
N
0.758