CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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sall4
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-485252
T145428_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH67314
C2H2 ZF
358
380
HKCKFCGKVFGNDSALQIHLRSH
AAH67314
C2H2 ZF
386
408
YKCNICGNRFTTKGNLKVHFQRH
AAH67314
C2H2 ZF
569
591
FKCKICGRAFSTKSNLKTHYGVH
AAH67314
C2H2 ZF
601
623
HSCPICQKKFTNAVVLQQHIRMH
AAH67314
C2H2 ZF
884
906
HICHTCGKNFSSASALQIHERTH
AAH67314
C2H2 ZF
912
934
FACTICGRAFTTKGNLKVHVGTH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAA85900
Xenopus laevis
BAA85900
N
0.823
sall4.L
Xenopus laevis
XB-GENE-485256
N
0.812
ENSSHAG00000018013
Sarcophilus harrisii
ENSSHAG00000018013
N
0.787
Alligator_sinensis_CCG001716.1
Alligator sinensis
Alligator_sinensis_CCG001716.1
N
0.787
Gfo_R009587
Geospiza fortis
Gfo_R009587
N
0.787
SALL4
Monodelphis domestica
ENSMODG00000016387
N
0.787
Cmyd_10017461
Chelonia mydas
Cmyd_10017461
N
0.787
ENSPSIG00000009066
Pelodiscus sinensis
ENSPSIG00000009066
N
0.787
ENSAPLG00000006498
Anas platyrhynchos
ENSAPLG00000006498
N
0.787
ENSFALG00000013149
Ficedula albicollis
ENSFALG00000013149
N
0.787
ENSGALG00000007834
Gallus gallus
ENSGALG00000007834
N
0.787
Pvit_03345
Pogona vitticeps
Pvit_03345
N
0.777
SALL4
Anolis carolinensis
ENSACAG00000012748
N
0.775
sall3a
Takifugu rubripes
ENSTRUG00000017423
N
0.773
ENSAMXG00000011111
Astyanax mexicanus
ENSAMXG00000011111
N
0.771
ENSONIG00000013791
Oreochromis niloticus
ENSONIG00000013791
N
0.763
sall3.S
Xenopus laevis
XB-GENE-17340458
N
0.763
sall3b
Gasterosteus aculeatus
ENSGACG00000002533
N
0.760
ENSMEUG00000005793
Macropus eugenii
ENSMEUG00000005793
N
0.757