gw.28.157.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw.28.157.1 T140135_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS3
M02880_2.00 		Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG		 SELEX
Jolma et al.(2013)
GLIS3_1 		0.807 0.936
GLIS3
M10169_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_01 		0.807 0.936
GLIS3
M10170_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6_01 		0.807 0.936
GLIS3
M10171_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF515_Q6 		0.807 0.936
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.28.157.1 C2H2 ZF 1 24
gw.28.157.1 C2H2 ZF 33 60
gw.28.157.1 C2H2 ZF 67 90
gw.28.157.1 C2H2 ZF 96 120
gw.28.157.1 C2H2 ZF 126 148

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.827
GLIS3 Gallus gallus ENSGALG00000010180 I 0.817
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.817
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.817
Aan_R004381 Calypte anna Aan_R004381 I 0.815
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.813
GLIS3 Taeniopygia guttata ENSTGUG00000005266 I 0.813
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.811
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.807
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.807
Glis3 Mus musculus ENSMUSG00000052942 I 0.807
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.807
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.807
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.807
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.807
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.807
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.807
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.807
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.807
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.807
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.807
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.807
GLIS3 Equus caballus ENSECAG00000020544 I 0.807
GLIS3 Homo sapiens ENSG00000107249 D 0.807
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.807
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.807
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.807
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.807
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.807
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.807
glis1b Danio rerio ENSDARG00000027933 I 0.805
ENSP00000384734-D2 Bos grunniens ENSP00000384734-D2 I 0.805
ENSPFOG00000017914 Poecilia formosa ENSPFOG00000017914 I 0.805
GLIS1 Tetraodon nigroviridis ENSTNIG00000010694 I 0.805
GLIS1 Cavia porcellus ENSCPOG00000009497 I 0.805
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.805
ENSLOCG00000003071 Lepisosteus oculatus ENSLOCG00000003071 I 0.805
ENSORLG00000003872 Oryzias latipes ENSORLG00000003872 I 0.805
ENSGMOG00000018511 Gadus morhua ENSGMOG00000018511 I 0.805
ENSXMAG00000013077 Xiphophorus maculatus ENSXMAG00000013077 I 0.805
ENSMEUG00000009882 Macropus eugenii ENSMEUG00000009882 I 0.805
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.805
GLIS1 Gasterosteus aculeatus ENSGACG00000012109 I 0.805
ENSOARG00000013378 Ovis aries ENSOARG00000013378 I 0.805
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.805
GLIS3 Vicugna pacos ENSVPAG00000005473 I 0.805
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.805
ENSTRUG00000001198 Takifugu rubripes ENSTRUG00000001198 I 0.805
glis3 Xenopus tropicalis XB-GENE-984727 I 0.798
GLIS3 Procavia capensis ENSPCAG00000004139 I 0.798
ENSPPYG00000019250 Pongo abelii ENSPPYG00000019250 I 0.798
ENSORLG00000007755 Oryzias latipes ENSORLG00000007755 I 0.791
ENSFALG00000010519 Ficedula albicollis ENSFALG00000010519 I 0.791
ENSPFOG00000019805 Poecilia formosa ENSPFOG00000019805 I 0.791
Gfo_R012286 Geospiza fortis Gfo_R012286 I 0.790
ENSONIG00000014033 Oreochromis niloticus ENSONIG00000014033 I 0.789
ENSPFOG00000002618 Poecilia formosa ENSPFOG00000002618 I 0.784
ENSXMAG00000005337 Xiphophorus maculatus ENSXMAG00000005337 I 0.784
glis1a Danio rerio ENSDARG00000068580 I 0.782
ENSXMAG00000005013 Xiphophorus maculatus ENSXMAG00000005013 I 0.782
DAPPUDRAFT_347217 Daphnia pulex DAPPUDRAFT_347217 I 0.773
SMAR005079 Strigamia maritima SMAR005079 I 0.772
GLIS1 Pan troglodytes ENSPTRG00000000756 I 0.770
Ocbimv22014778m.g Octopus bimaculoides Ocbimv22014778m.g I 0.763
ML145833a Mnemiopsis leidyi ML145833a I 0.760
ENSGALG00000010721 Gallus gallus ENSGALG00000010721 I 0.759
ENSAPLG00000013972 Anas platyrhynchos ENSAPLG00000013972 I 0.759
Pvit_11533 Pogona vitticeps Pvit_11533 I 0.759
ENSLACG00000012147 Latimeria chalumnae ENSLACG00000012147 I 0.759
GLIS1 Meleagris gallopavo ENSMGAG00000011303 I 0.759
Aan_R004053 Calypte anna Aan_R004053 I 0.759
ENSPSIG00000002846 Pelodiscus sinensis ENSPSIG00000002846 I 0.759
Afo_R001041 Aptenodytes forsteri Afo_R001041 I 0.759
GLIS1 Taeniopygia guttata ENSTGUG00000009294 I 0.757
Brh_R013214 Buceros rhinoceros Brh_R013214 I 0.757
Tal_R012308 Tyto alba Tal_R012308 I 0.757
ENSFALG00000011974 Ficedula albicollis ENSFALG00000011974 I 0.757
Gfo_R010168 Geospiza fortis Gfo_R010168 I 0.757
ENSAMXG00000019181 Astyanax mexicanus ENSAMXG00000019181 I 0.756