CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15021707
(
Schmidtea mediterranea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMU15021707
T145140_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.761
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15021707
C2H2 ZF
195
219
HICTVEGCGKSYSKSSHLKAHMRVH
SMU15021707
C2H2 ZF
225
249
YRCDWFGCSWCFARSDELTRHYRRH
SMU15021707
C2H2 ZF
255
277
FRCKICQRSFSRSDHLSLHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Schmidtea mediterranea
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMU15026765
Schmidtea mediterranea
SMU15026765
I
0.772
ENSMODG00000010888
Monodelphis domestica
ENSMODG00000010888
I
0.766
AATE020384
Anopheles atroparvus
AATE020384
I
0.765
AARA000098
Anopheles arabiensis
AARA000098
I
0.765
AALB010205
Anopheles albimanus
AALB010205
I
0.765
CpipJ_CPIJ004724
Culex pipiens
CpipJ_CPIJ004724
I
0.765
ACHR001612
Anopheles christyi
ACHR001612
I
0.765
ASTEI07110
Anopheles stephensi
ASTEI07110
I
0.765
ACOM041708
Anopheles coluzzii
ACOM041708
I
0.765
AMEM014876
Anopheles merus
AMEM014876
I
0.765
AMIN001268
Anopheles minimus
AMIN001268
I
0.765
AFUN011554
Anopheles funestus
AFUN011554
I
0.765
AFAF003290
Anopheles farauti
AFAF003290
I
0.765
ADIR011723
Anopheles dirus
ADIR011723
I
0.765
ACUA022835
Anopheles culicifacies
ACUA022835
I
0.765
ENSCSAVG00000002903
Ciona savignyi
ENSCSAVG00000002903
I
0.765
CBG04311
Caenorhabditis briggsae
CBG04311
I
0.765
CBN12606
Caenorhabditis brenneri
CBN12606
I
0.765
AGAP010520
Anopheles gambiae
AGAP010520
I
0.765
ADAC003701
Anopheles darlingi
ADAC003701
I
0.765
AAEL004806
Aedes aegypti
AAEL004806
I
0.765
AQUA001297
Anopheles quadriannulatus
AQUA001297
I
0.765
CBN19589
Caenorhabditis brenneri
CBN19589
I
0.765
zf(c2h2)-23
Ciona intestinalis
ENSCING00000014976
I
0.765
CRE26517
Caenorhabditis remanei
CRE26517
I
0.765
CPIJ004724
Culex quinquefasciatus
CPIJ004724
I
0.765
L892_g18702
Steinernema scapterisci
L892_g18702
I
0.762
KLF8
Cavia porcellus
ENSCPOG00000010165
I
0.762
scaffold1313-EXSNAP2012.6
Pristionchus exspectatus
scaffold1313-EXSNAP2012.6
I
0.762
L889_g30961
Steinernema feltiae
L889_g30961
I
0.762
DAPPUDRAFT_27999
Daphnia pulex
DAPPUDRAFT_27999
I
0.762
klf-3
Caenorhabditis elegans
WBGene00003480
D
0.761
ACYPI000624
Acyrthosiphon pisum
ACYPI000624
I
0.761
CJA34076
Caenorhabditis japonica
CJA34076
I
0.761
L893_g29274
Steinernema glaseri
L893_g29274
I
0.759
L898_g19820
Steinernema monticolum
L898_g19820
I
0.759
Pvit_14591
Pogona vitticeps
Pvit_14591
I
0.758
CapteG137485
Capitella teleta
CapteG137485
I
0.758