SMU15021707 (Schmidtea mediterranea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMU15021707 T145140_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH

DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15021707 C2H2 ZF 195 219
SMU15021707 C2H2 ZF 225 249
SMU15021707 C2H2 ZF 255 277

Links

Other C2H2 ZF family TFs
Other Schmidtea mediterranea TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI000624 Acyrthosiphon pisum ACYPI000624 I 0.761
AAEL004806 Aedes aegypti AAEL004806 I 0.765
AALB010205 Anopheles albimanus AALB010205 I 0.765
AARA000098 Anopheles arabiensis AARA000098 I 0.765
AATE020384 Anopheles atroparvus AATE020384 I 0.765
ACHR001612 Anopheles christyi ACHR001612 I 0.765
ACOM041708 Anopheles coluzzii ACOM041708 I 0.765
ACUA022835 Anopheles culicifacies ACUA022835 I 0.765
ADAC003701 Anopheles darlingi ADAC003701 I 0.765
ADIR011723 Anopheles dirus ADIR011723 I 0.765
AFAF003290 Anopheles farauti AFAF003290 I 0.765
AFUN011554 Anopheles funestus AFUN011554 I 0.765
AGAP010520 Anopheles gambiae AGAP010520 I 0.765
AMEM014876 Anopheles merus AMEM014876 I 0.765
AMIN001268 Anopheles minimus AMIN001268 I 0.765
AQUA001297 Anopheles quadriannulatus AQUA001297 I 0.765
ASTEI07110 Anopheles stephensi ASTEI07110 I 0.765
CBN12606 Caenorhabditis brenneri CBN12606 I 0.765
CBN19589 Caenorhabditis brenneri CBN19589 I 0.765
CBG04311 Caenorhabditis briggsae CBG04311 I 0.765
klf-3 Caenorhabditis elegans WBGene00003480 D 0.761
CJA34076 Caenorhabditis japonica CJA34076 I 0.761
CRE26517 Caenorhabditis remanei CRE26517 I 0.765
CapteG137485 Capitella teleta CapteG137485 I 0.758
KLF8 Cavia porcellus ENSCPOG00000010165 I 0.762
zf(c2h2)-23 Ciona intestinalis ENSCING00000014976 I 0.765
ENSCSAVG00000002903 Ciona savignyi ENSCSAVG00000002903 I 0.765
CpipJ_CPIJ004724 Culex pipiens CpipJ_CPIJ004724 I 0.765
CPIJ004724 Culex quinquefasciatus CPIJ004724 I 0.765
DAPPUDRAFT_27999 Daphnia pulex DAPPUDRAFT_27999 I 0.762
ENSMODG00000010888 Monodelphis domestica ENSMODG00000010888 I 0.766
Pvit_14591 Pogona vitticeps Pvit_14591 I 0.758
scaffold1313-EXSNAP2012.6 Pristionchus exspectatus scaffold1313-EXSNAP2012.6 I 0.762
SMU15026765 Schmidtea mediterranea SMU15026765 I 0.772
L889_g30961 Steinernema feltiae L889_g30961 I 0.762
L893_g29274 Steinernema glaseri L893_g29274 I 0.759
L898_g19820 Steinernema monticolum L898_g19820 I 0.759
L892_g18702 Steinernema scapterisci L892_g18702 I 0.762