CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_09690
(
Colletotrichum higginsianum
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
CH063_09690
T158382_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF38655
C2H2 ZF
89
111
YQCAHCQRRYSRPEHLARHIQTH
CCF38655
C2H2 ZF
117
139
FACQICGKAFARQDLLKRHVANH
CCF38655
Zinc cluster
163
199
HACRPCATARVKCEEVKPCTRCRNRNLNCEYTSTEAG
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Colletotrichum higginsianum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cob_03431
Colletotrichum orbiculare
Cob_03431
N
0.976
CGGC5_177
Colletotrichum gloeosporioides
CGGC5_177
N
0.976
GLRG_01663
Colletotrichum graminicola
GLRG_01663
N
0.964
CFIO01_13496
Colletotrichum fioriniae
CFIO01_13496
N
0.964
CSUB01_03640
Colletotrichum sublineola
CSUB01_03640
N
0.952
PFICI_00473
Pestalotiopsis fici
PFICI_00473
I
0.867
VDAG_04469
Verticillium dahliae
VDAG_04469
I
0.807
estExt_Genewise1Plus.C_60463
Cryphonectria parasitica
estExt_Genewise1Plus.C_60463
I
0.747
GGTG_12224
Gaeumannomyces graminis
GGTG_12224
I
0.711