CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFICI_00473
(
Pestalotiopsis fici
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
PFICI_00473
T158599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02787
M01894_2.00
Neurospora crassa
NNNNCGGRW
WYCCGNNNN
PBM
Weirauch et al.(2014)
pTH9671
0.747
0.747
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS86645
C2H2 ZF
116
138
YQCADCQRRYSRPEHLARHIQTH
ETS86645
C2H2 ZF
144
166
FSCQVCGKAFARADLLKRHAANH
ETS86645
Zinc cluster
190
226
HACKACATARVKCEEVKPCTRCRNRKLTCEYASSEAG
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Pestalotiopsis fici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CH063_09690
Colletotrichum higginsianum
CH063_09690
N
0.867
Cob_03431
Colletotrichum orbiculare
Cob_03431
N
0.855
CGGC5_177
Colletotrichum gloeosporioides
CGGC5_177
N
0.855
CFIO01_13496
Colletotrichum fioriniae
CFIO01_13496
N
0.843
GLRG_01663
Colletotrichum graminicola
GLRG_01663
N
0.843
CSUB01_03640
Colletotrichum sublineola
CSUB01_03640
N
0.831
estExt_Genewise1Plus.C_60463
Cryphonectria parasitica
estExt_Genewise1Plus.C_60463
I
0.819
VDAG_04469
Verticillium dahliae
VDAG_04469
I
0.759
GGTG_12224
Gaeumannomyces graminis
GGTG_12224
I
0.747
NCU02787
Neurospora crassa
NCU02787
D
0.747
NEUTE1DRAFT_126939
Neurospora tetrasperma
NEUTE1DRAFT_126939
I
0.733
PODANS_1_7150
Podospora anserina
PODANS_1_7150
I
0.714
MAPG_09654
Magnaporthe poae
MAPG_09654
I
0.711
NechaG68433
Fusarium solani
NechaG68433
N
0.707
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
Nectria haematococca
estExt_Genewise1Plus.C_sca_3_chr4_2_00984
N
0.707