CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PFICI_00473
(
Pestalotiopsis fici
)
C2H2 ZF,Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00172 (Zn_clus)
IPR007087
IPR001138
PFICI_00473
T158599_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02787
M01894_2.00
Neurospora crassa
NNNNCGGRW
WYCCGNNNN
PBM
Weirauch et al.(2014)
pTH9671
0.747
0.747
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS86645
C2H2 ZF
116
138
YQCADCQRRYSRPEHLARHIQTH
ETS86645
C2H2 ZF
144
166
FSCQVCGKAFARADLLKRHAANH
ETS86645
Zinc cluster
190
226
HACKACATARVKCEEVKPCTRCRNRKLTCEYASSEAG
Links
Other
C2H2 ZF,Zinc cluster
family TFs
Other
Pestalotiopsis fici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy