Carubv10014086m.g (Capsella rubella)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 Carubv10014086m.g T160646_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10014086m CBF/NF-Y 190 249

Links

Other CBF/NF-Y family TFs
Other Capsella rubella TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 1.000
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.964
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.964
UNE8 Arabidopsis thaliana AT3G05690 N 0.964
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.946
Bo1g150420 Brassica oleracea Bo1g150420 N 0.911
Bo5g145140 Brassica oleracea Bo5g145140 N 0.911
Bo3g060160 Brassica oleracea Bo3g060160 N 0.911
Bra040529 Brassica rapa Bra040529 N 0.911
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.893
Bra001164 Brassica rapa Bra001164 N 0.893
NFYA10 Arabidopsis thaliana AT5G06510 N 0.893
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.875
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.857
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.857
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.857
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.821
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.804
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N 0.804
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.804
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 0.804
Cla017884 Citrullus lanatus Cla017884 N 0.804
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.804
Bra009200 Brassica rapa Bra009200 N 0.804
Bo9g176100 Brassica oleracea Bo9g176100 N 0.804
Ca_00866 Cicer arietinum Ca_00866 N 0.786
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.786
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.786
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.786
PK20005.1 Cannabis sativa PK20005.1 N 0.786
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.786
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.786
Ca_14455 Cicer arietinum Ca_14455 N 0.768
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.768
Cla017115 Citrullus lanatus Cla017115 N 0.768
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.768
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.768
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N 0.768
Pm027028 Prunus mume Pm027028 N 0.768
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N 0.768
TCM_022984 Theobroma cacao TCM_022984 N 0.768
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N 0.768
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N 0.768
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.768
PK26326.1 Cannabis sativa PK26326.1 N 0.768
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.750
GLYMA15G18970 Glycine max GLYMA15G18970 I 0.750
MDP0000827821 Malus domestica MDP0000827821 N 0.750
29912.m005288 Ricinus communis 29912.m005288 N 0.750
MDP0000948645 Malus domestica MDP0000948645 N 0.750
GLYMA09G07960 Glycine max GLYMA09G07960 I 0.750
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.750
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.750
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.750
gene12709-v1.0-hybrid Fragaria vesca gene12709-v1.0-hybrid N 0.750
MTR_2g041090 Medicago truncatula MTR_2g041090 N 0.750
MDP0000375005 Malus domestica MDP0000375005 N 0.750
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.750
POPTR_0006s14740 Populus trichocarpa POPTR_0006s14740 N 0.750
Pm026038 Prunus mume Pm026038 N 0.750
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.750
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N 0.750
Ca_11593 Cicer arietinum Ca_11593 N 0.750
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.750
GLYMA17G05920 Glycine max GLYMA17G05920 I 0.750
VIT_11s0016g01480 Vitis vinifera VIT_11s0016g01480 N 0.750
TCM_037576 Theobroma cacao TCM_037576 N 0.750
MDP0000588222 Malus domestica MDP0000588222 N 0.732
GLYMA13G16770 Glycine max GLYMA13G16770 N 0.732
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.732
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N 0.732
MDP0000129029 Malus domestica MDP0000129029 N 0.732
Si019645m.g Setaria italica Si019645m.g N 0.732
Solyc12g009050.1 Solanum lycopersicum Solyc12g009050.1 N 0.732
MDP0000279028 Malus domestica MDP0000279028 N 0.732
MDP0000785523 Malus domestica MDP0000785523 N 0.732
GRMZM5G857944 Zea mays GRMZM5G857944 N 0.732
PGSC0003DMG400000272 Solanum tuberosum PGSC0003DMG400000272 N 0.732
29333.m001059 Ricinus communis 29333.m001059 N 0.732
MDP0000223651 Malus domestica MDP0000223651 N 0.714
MDP0000506954 Malus domestica MDP0000506954 N 0.714
SapurV1A.0087s0010 Salix purpurea SapurV1A.0087s0010 N 0.714
Pavir.J00945 Panicum virgatum Pavir.J00945 I 0.714
Pavir.Aa00318 Panicum virgatum Pavir.Aa00318 I 0.714
PK21261.1 Cannabis sativa PK21261.1 I 0.714
SapurV1A.1588s0020 Salix purpurea SapurV1A.1588s0020 N 0.714
mgf023644m Mimulus guttatus mgf023644m N 0.714
Ca_10039 Cicer arietinum Ca_10039 N 0.714
VIT_06s0004g02270 Vitis vinifera VIT_06s0004g02270 N 0.714
Ca_20250 Cicer arietinum Ca_20250 N 0.714
Cla015490 Citrullus lanatus Cla015490 I 0.714
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N 0.714
TCM_024732 Theobroma cacao TCM_024732 I 0.714
Sb04g034760 Sorghum bicolor Sb04g034760 I 0.714
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.714
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.714
MTR_8g019540 Medicago truncatula MTR_8g019540 I 0.714
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N 0.714
Pm016266 Prunus mume Pm016266 N 0.714
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N 0.714
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.714
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.714
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I 0.714
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I 0.714
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.714
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.714
mgf025421m Mimulus guttatus mgf025421m N 0.714
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I 0.714
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N 0.714
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.714
GLYMA16G00711 Glycine max GLYMA16G00711 I 0.714
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I 0.714