Bra004096 (Brassica rapa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bra004096 T163031_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004096.1-P CG-1 13 127

Links

Other CG-1 family TFs
Other Brassica rapa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g099030 Brassica oleracea Bo6g099030 N 0.991
Bra034007 Brassica rapa Bra034007 N 0.842
Bo6g103720 Brassica oleracea Bo6g103720 N 0.833
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.825
Bra004217 Brassica rapa Bra004217 N 0.825
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.825
Carubv10022369m.g Capsella rubella Carubv10022369m.g N 0.816
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N 0.816
Bo2g055720 Brassica oleracea Bo2g055720 N 0.816
CMTA4 Arabidopsis thaliana AT1G67310 N 0.807
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.798
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.772
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.754
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.754
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.754
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.746
mgf025436m Mimulus guttatus mgf025436m N 0.746
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.746
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.746
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.746
Ca_08511 Cicer arietinum Ca_08511 N 0.746
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.746
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.737
PK06349.1 Cannabis sativa PK06349.1 N 0.737
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.737
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.728
TCM_008731 Theobroma cacao TCM_008731 N 0.728
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.719
Lus10011352.g Linum usitatissimum Lus10011352.g N 0.711
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.711
Cla000701 Citrullus lanatus Cla000701 N 0.711
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.711
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.711
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.702
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N 0.702
MDP0000262800 Malus domestica MDP0000262800 N 0.702
Pm007031 Prunus mume Pm007031 N 0.702
Lus10003119.g Linum usitatissimum Lus10003119.g N 0.702
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N 0.702