rbpjb (Danio rerio)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSDARG00000052091 T166044_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.969 0.969
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.969 0.969
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.969 0.969
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.969 0.969
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.969 0.969
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.969 0.969
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.969 0.969
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.969 0.969
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.969 0.969
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.969 0.969
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.969 0.969
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.969 0.969
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.969 0.969
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.779 0.779
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000087012 CSL 35 165
ENSDARP00000132471 CSL 35 165

Links

Other CSL family TFs
Other Danio rerio TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBPJ Homo sapiens ENSG00000168214 D 1.000
rbpj.S Xenopus laevis XB-GENE-865998 I 0.977
AAB05479 Xenopus laevis AAB05479 I 0.977
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.969
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.969
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.969
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.969
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.969
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.969
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.969
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.969
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.969
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.969
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.969
Rbpj Mus musculus ENSMUSG00000039191 D 0.969
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.969
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.969
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.969
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.969
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.969
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.969
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.969
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.969
rbpj Xenopus tropicalis XB-GENE-490756 I 0.969
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.969
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.969
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.969
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.969
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.969
RBPJ Sorex araneus ENSSARG00000001169 I 0.969
RBPJ Sus scrofa ENSSSCG00000022155 I 0.969
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.969
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.969
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.969
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.969
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.969
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.969
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.969
RBPJ Canis familiaris ENSCAFG00000016387 I 0.969
RBPJ Bos taurus ENSBTAG00000003602 I 0.969
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.969
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.969
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I 0.969
RBPJ Equus caballus ENSECAG00000019257 I 0.969
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.969
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.969
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.969
Ogr02745 Ophisaurus gracilis Ogr02745 I 0.966
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.962
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.962
RBPJ Gallus gallus ENSGALG00000014365 I 0.962
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.962
Tal_R001466 Tyto alba Tal_R001466 I 0.962
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.962
Aan_R011115 Calypte anna Aan_R011115 I 0.962
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.962
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.962
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.962
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.962
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.962
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.954
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.954
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.954
rbpja Danio rerio ENSDARG00000003398 I 0.947
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.946
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.944
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.935
RBPJ Felis catus ENSFCAG00000030363 I 0.931
RBPJ Vicugna pacos ENSVPAG00000003620 I 0.918
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.915
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.913
BGLB010819 Biomphalaria glabrata BGLB010819 I 0.912
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.910
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.900
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.899
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.899
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.840
rbpja Oryzias latipes ENSORLG00000004882 I 0.837
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.833
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.833
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.833
D915_08967 Fasciola hepatica D915_08967 I 0.833
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.833
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.833
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.832
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.832
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.829
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I 0.824
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I 0.824
SMAR001432 Strigamia maritima SMAR001432 I 0.817
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.814
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.809
NV17858 Nasonia vitripennis NV17858 I 0.802
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.802
KGM_08407 Danaus plexippus KGM_08407 I 0.800
HMEL017244 Heliconius melpomene HMEL017244 I 0.800
TC014468 Tribolium castaneum TC014468 I 0.794
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.794
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.792
SINV15808 Solenopsis invicta SINV15808 I 0.792
ACEP17167 Atta cephalotes ACEP17167 I 0.792
L798_15068 Zootermopsis nevadensis L798_15068 I 0.792
GB45655 Apis mellifera GB45655 I 0.792
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.792
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.786
ISCW010197 Ixodes scapularis ISCW010197 I 0.786
LotgiG159505 Lottia gigantea LotgiG159505 I 0.786
CapteG179039 Capitella teleta CapteG179039 I 0.786
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.785
tetur04g02700 Tetranychus urticae tetur04g02700 I 0.783
tetur04g02730 Tetranychus urticae tetur04g02730 I 0.783
GM15894 Drosophila sechellia FBgn0170810 I 0.779
GJ11880 Drosophila virilis FBgn0199134 I 0.779
GE20814 Drosophila yakuba FBgn0238107 I 0.779
GL26026 Drosophila persimilis FBgn0163608 I 0.779
GH10915 Drosophila grimshawi FBgn0118396 I 0.779
GG25142 Drosophila erecta FBgn0117267 I 0.779
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.779
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.779
AATE009298 Anopheles atroparvus AATE009298 I 0.779
GF14905 Drosophila ananassae FBgn0091930 I 0.779
Su(H) Drosophila melanogaster FBgn0004837 D 0.779
Su(H) Drosophila simulans FBgn0027417 I 0.779
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.777
CLEC005205 Cimex lectularius CLEC005205 I 0.777
PHUM462870 Pediculus humanus PHUM462870 I 0.777
ASIS021327 Anopheles sinensis ASIS021327 I 0.776
AQUA011533 Anopheles quadriannulatus AQUA011533 I 0.774
MDOA002342 Musca domestica MDOA002342 I 0.771
ACUA014515 Anopheles culicifacies ACUA014515 I 0.771
ACOM040639 Anopheles coluzzii ACOM040639 I 0.771
AFUN007280 Anopheles funestus AFUN007280 I 0.771
AMEM004324 Anopheles merus AMEM004324 I 0.771
ADIR011431 Anopheles dirus ADIR011431 I 0.771
AMIN005880 Anopheles minimus AMIN005880 I 0.771
AFAF012186 Anopheles farauti AFAF012186 I 0.771
GI13259 Drosophila mojavensis FBgn0136016 I 0.771
AGAP008935 Anopheles gambiae AGAP008935 I 0.771
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.771
LCUP003485 Lucilia cuprina LCUP003485 I 0.771
AALB007981 Anopheles albimanus AALB007981 I 0.771
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
AAEL006419 Aedes aegypti AAEL006419 I 0.763
tetur11g00180 Tetranychus urticae tetur11g00180 I 0.763
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.763
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
MESCA005881 Megaselia scalaris MESCA005881 I 0.758
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I 0.750
CPIJ004183 Culex quinquefasciatus CPIJ004183 I 0.750
NV17967 Nasonia vitripennis NV17967 I 0.742
AEPI005106 Anopheles epiroticus AEPI005106 I 0.736
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.736
AMEC017285 Anopheles melas AMEC017285 I 0.733
AARA009493 Anopheles arabiensis AARA009493 I 0.733
ADAC001896 Anopheles darlingi ADAC001896 I 0.729
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.727
PPAI000792 Phlebotomus papatasi PPAI000792 I 0.726
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.725
AMAM009373 Anopheles maculatus AMAM009373 I 0.725
tetur11g06371 Tetranychus urticae tetur11g06371 I 0.725
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I 0.722
HelroG186992 Helobdella robusta HelroG186992 I 0.720
su(h) Ciona intestinalis ENSCING00000000838 I 0.715
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.715
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.714
NECAME_17145 Necator americanus NECAME_17145 I 0.714
D915_08968 Fasciola hepatica D915_08968 I 0.712
BTMF_0000608501 Brugia timori BTMF_0000608501 I 0.700