CUX1 (Macaca mulatta)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSMMUG00000021461 T167140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
1.000 1.000
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
1.000 1.000
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
1.000 1.000
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
1.000 1.000
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
1.000 1.000
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
1.000 1.000
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
1.000 1.000
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
1.000 1.000
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
1.000 1.000
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
1.000 1.000
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
1.000 1.000
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
1.000 1.000
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.993 0.993
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.993 0.993
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.885 0.885
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.885 0.885
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.885 0.885
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.885 0.885
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000010686 CUT 364 441
ENSMMUP00000010686 CUT 756 832
ENSMMUP00000010686 CUT 939 1017
ENSMMUP00000010686 Homeodomain 1062 1118
ENSMMUP00000028271 CUT 538 615
ENSMMUP00000028271 CUT 930 1006
ENSMMUP00000028271 CUT 1113 1191
ENSMMUP00000028271 Homeodomain 1236 1292
ENSMMUP00000028274 CUT 538 615
ENSMMUP00000028274 CUT 908 984
ENSMMUP00000028274 CUT 1091 1169
ENSMMUP00000028274 Homeodomain 1214 1270

Links

Other CUT,Homeodomain family TFs
Other Macaca mulatta TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.000
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.000
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.000
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.000
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.000
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.000
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.000
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.000
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.000
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.000
TFCP2 Bos taurus ENSBTAG00000019312 I 0.000
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.000
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.000
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.000
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.000
Aan_R003641 Calypte anna Aan_R003641 I 0.000
Aan_R009566 Calypte anna Aan_R009566 I 0.000
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.000
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.000
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.000
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.000
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.000
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.000
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.000
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.000
tfcp2 Danio rerio ENSDARG00000060306 I 0.000
TFCP2 Equus caballus ENSECAG00000020650 I 0.000
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.000
TFCP2 Felis catus ENSFCAG00000030292 I 0.000
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.000
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.000
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.000
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.000
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.000
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.000
tfcp2l1 Gasterosteus aculeatus ENSGACG00000001549 N 0.000
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.000
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.000
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.000
TFCP2L1 Homo sapiens ENSG00000115112 D 0.000
TFCP2 Homo sapiens ENSG00000135457 D 0.000
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.000
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.000
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.000
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.000
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.000
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.000
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.000
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.000
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.000
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.000
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.000
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.000
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.000
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.000
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.000
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.000
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.000
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.000
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.000
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.000
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.000
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.000
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.000
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.000
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.000
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.000
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.000
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.000
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.000
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.000
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.000
ENSPFOG00000014602 Poecilia formosa ENSPFOG00000014602 N 0.000
ENSPFOG00000001485 Poecilia formosa ENSPFOG00000001485 N 0.000
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.000
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.000
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.000
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.000
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.000
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.000
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.000
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.000
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.000
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.000
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.000
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.000
tfcp2l1 Takifugu rubripes ENSTRUG00000002438 N 0.000
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.000
tfcp2l1 Tetraodon nigroviridis ENSTNIG00000017829 N 0.000
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.000
Tal_R011103 Tyto alba Tal_R011103 I 0.000
Tal_R010177 Tyto alba Tal_R010177 I 0.000
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.000
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.000
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.000
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.000