ENSSHAG00000009458 (Sarcophilus harrisii)
CUT,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
ENSSHAG00000009458 T167260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CUX2
M02940_2.00
Homo sapiens
ATCRATAHNNDWATCGAT

ATCGATWHNNDTATYGAT
SELEX
Jolma et al.(2013)
CUX2_1
0.976 0.976
CUX2
M02941_2.00
Homo sapiens
DDATYGATYA

TRATCRATHH
SELEX
Jolma et al.(2013)
CUX2_2
0.976 0.976
CUX2
M04665_2.00
Homo sapiens
NTRATCGATYRN

NYRATCGATYAN
SELEX
Yin et al.(2017)
CUX2_eDBD_HT-SELEX
0.976 0.976
CUX2
M04666_2.00
Homo sapiens
BYRATCGATYRB

VYRATCGATYRV
SELEX
Yin et al.(2017)
CUX2_eDBD_Methyl-HT-SELEX
0.976 0.976
Cux2
M09025_2.00
Mus musculus
NBBATTGATYD

HRATCAATVVN
Misc
Kulakovskiy et al.(2013)
CUX2_MOUSE.H11MO.0.C
0.972 0.972
CUX1
M02946_2.00
Homo sapiens
ATCRATHNNNDATCRAT

ATYGATHNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_1
0.882 0.882
CUX1
M02947_2.00
Homo sapiens
ATCRATHNNNNDATCRAT

ATYGATHNNNNDATYGAT
SELEX
Jolma et al.(2013)
CUX1_2
0.882 0.882
CUX1
M02948_2.00
Homo sapiens
TDATCRATNN

NNATYGATHA
SELEX
Jolma et al.(2013)
CUX1_3
0.882 0.882
CUX1
M04679_2.00
Homo sapiens
NDATCRATNN

NNATYGATHN
SELEX
Yin et al.(2017)
CUX1_eDBD_HT-SELEX
0.882 0.882
CUX1
M09023_2.00
Homo sapiens
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_HUMAN.H11MO.0.C
0.882 0.882
Cux1
M09024_2.00
Mus musculus
RBRVNDATYGRTBN

NVAYCRATHNBYVY
Misc
Kulakovskiy et al.(2013)
CUX1_MOUSE.H11MO.0.C
0.882 0.882
CUX1
M10422_2.00
Homo sapiens
CCAATAATCRAT

ATYGATTATTGG
Transfac
Matys et al.(2006)
V$CDP_01
0.882 0.882
CUX1
M10423_2.00
Homo sapiens
DWDATCGATYADHDH

DHDHTRATCGATHWH
Transfac
Matys et al.(2006)
V$CDP_02
0.882 0.882
CUX1
M10424_2.00
Homo sapiens
SCVATCRATN

NATYGATBGS
Transfac
Matys et al.(2006)
V$CDPCR1_01
0.882 0.882
CUX1
M10425_2.00
Homo sapiens
CVATABNTATYKGTG

CACMRATANVTATBG
Transfac
Matys et al.(2006)
V$CDPCR3_01
0.882 0.882
CUX1
M10426_2.00
Homo sapiens
SVSATCRATB

VATYGATSBS
Transfac
Matys et al.(2006)
V$CDPCR3HD_01
0.882 0.882
CUX1
M10427_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDP_Q6_01
0.882 0.882
CUX1
M10416_2.00
Canis familiaris
DHDATYGATYADYDW

WHRHTRATCRATHDH
Transfac
Matys et al.(2006)
V$CLOX_01
0.882 0.882
CUX1
M04680_2.00
Homo sapiens
NBATTGATHR

YDATCAATVN
SELEX
Yin et al.(2017)
CUX1_eDBD_Methyl-HT-SELEX
0.882 0.882
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000010973 CUT 449 527
ENSSHAP00000010973 CUT 798 874
ENSSHAP00000010973 CUT 949 1026
ENSSHAP00000010973 Homeodomain 1075 1131

Links

Other CUT,Homeodomain family TFs
Other Sarcophilus harrisii TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003487 Calypte anna Aan_R003487 I 0.878
Aan_R010335 Calypte anna Aan_R010335 I 0.976
Afo_R009437 Aptenodytes forsteri Afo_R009437 I 0.878
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I 0.878
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I 0.997
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I 0.875
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I 0.997
CUX2 Anolis carolinensis ENSACAG00000002281 I 0.972
CUX1 Anolis carolinensis ENSACAG00000015088 I 0.888
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I 0.979
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I 0.868
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I 0.930
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I 0.840
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I 0.878
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I 0.958
CUX2 Bos taurus ENSBTAG00000008571 I 0.979
CUX1 Bos taurus ENSBTAG00000010659 I 0.882
CUX2 Canis familiaris ENSCAFG00000008575 I 0.983
CUX1 Canis familiaris ENSCAFG00000013749 D 0.882
CUX2 Callithrix jacchus ENSCJAG00000011694 I 0.979
CUX1 Callithrix jacchus ENSCJAG00000016076 I 0.882
CUX2 Cavia porcellus ENSCPOG00000020483 I 0.976
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I 0.882
cux1a Danio rerio ENSDARG00000078459 I 0.868
cux2b Danio rerio ENSDARG00000086345 I 0.934
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I 0.962
CUX1 Erinaceus europaeus ENSEEUG00000005128 I 0.885
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I 0.986
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I 0.878
CUX2 Felis catus ENSFCAG00000003176 I 0.983
CUX1 Felis catus ENSFCAG00000008074 I 0.868
CUX2 Homo sapiens ENSG00000111249 D 0.979
CUX1 Homo sapiens ENSG00000257923 D 0.882
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I 0.705
cux2b Gasterosteus aculeatus ENSGACG00000013522 I 0.920
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I 0.878
CUX2 Gallus gallus ENSGALG00000004598 I 0.997
CUX2 Gorilla gorilla ENSGGOG00000012173 I 0.708
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I 0.715
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I 0.931
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I 0.958
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I 0.875
CUX2 Loxodonta africana ENSLAFG00000001145 I 0.976
CUX1 Loxodonta africana ENSLAFG00000002555 I 0.868
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I 0.875
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I 0.958
ENSMEUG00000004239 Macropus eugenii ENSMEUG00000004239 I 0.779
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I 0.736
CUX1 Meleagris gallopavo ENSMGAG00000003398 I 0.882
CUX2 Meleagris gallopavo ENSMGAG00000005225 I 0.997
CUX1 Microcebus murinus ENSMICG00000010274 I 0.881
CUX2 Myotis lucifugus ENSMLUG00000003239 I 0.979
CUX1 Myotis lucifugus ENSMLUG00000007264 I 0.882
CUX1 Macaca mulatta ENSMMUG00000021461 I 0.882
CUX2 Monodelphis domestica ENSMODG00000012254 I 0.993
CUX1 Monodelphis domestica ENSMODG00000013581 I 0.885
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I 0.972
Cux1 Mus musculus ENSMUSG00000029705 D 0.882
Cux2 Mus musculus ENSMUSG00000042589 D 0.972
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I 0.979
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I 0.882
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I 0.983
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I 0.868
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I 0.976
CUX2 Oryctolagus cuniculus ENSOCUG00000021923 I 0.969
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I 0.892
CUX2 Otolemur garnettii ENSOGAG00000029919 I 0.979
ENSONIG00000003797 Oreochromis niloticus ENSONIG00000003797 I 0.782
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I 0.928
CUX1 Ochotona princeps ENSOPRG00000000165 I 0.861
CUX2 Ochotona princeps ENSOPRG00000006461 I 0.972
cux2b Oryzias latipes ENSORLG00000015973 I 0.927
ENSP00000261726 Macaca fascicularis ENSP00000261726 I 0.979
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I 0.979
ENSP00000353401 Macaca fascicularis ENSP00000353401 I 0.882
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I 0.882
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I 0.708
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I 0.882
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I 0.931
ENSPSIG00000003536 Pelodiscus sinensis ENSPSIG00000003536 I 0.715
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I 0.875
CUX2 Pan troglodytes ENSPTRG00000005455 I 0.844
CUX1 Pan troglodytes ENSPTRG00000019531 I 0.882
CUX2 Pteropus vampyrus ENSPVAG00000013176 I 0.976
CUX1 Pteropus vampyrus ENSPVAG00000017756 I 0.712
Cux2 Rattus norvegicus ENSRNOG00000001259 I 0.962
Cux1 Rattus norvegicus ENSRNOG00000001424 I 0.882
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I 0.885
CUX2 Sus scrofa ENSSSCG00000009831 I 0.979
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I 0.965
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I 0.872
CUX1 Taeniopygia guttata ENSTGUG00000004386 I 0.878
CUX2 Taeniopygia guttata ENSTGUG00000006470 I 0.969
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I 0.781
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I 0.920
CUX1 Takifugu rubripes ENSTRUG00000008546 I 0.752
cux2b Takifugu rubripes ENSTRUG00000015853 I 0.927
CUX2 Tursiops truncatus ENSTTRG00000000945 I 0.976
CUX1 Tursiops truncatus ENSTTRG00000014625 I 0.865
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I 0.938
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I 0.767
Gfo_R003142 Geospiza fortis Gfo_R003142 I 0.993
Gfo_R011360 Geospiza fortis Gfo_R011360 I 0.878
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I 0.865
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I 0.979
Ogr05066 Ophisaurus gracilis Ogr05066 I 0.878
Ogr05872 Ophisaurus gracilis Ogr05872 I 0.969
Pvit_01819 Pogona vitticeps Pvit_01819 I 0.888
Pvit_05599 Pogona vitticeps Pvit_05599 I 0.986
Tal_R013483 Tyto alba Tal_R013483 I 0.877
cux2 Xenopus tropicalis XB-GENE-487236 I 0.962
XP_002942311 Xenopus tropicalis XP_002942311 I 0.875