SELMODRAFT_19632 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_19632 T171108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DOF3.1
M01942_2.00
Arabidopsis thaliana
NCKTTNNN

NNNAAMGN
PBM
Weirauch et al.(2014)
pTH8190
0.583 0.583
DOF3.2
M01943_2.00
Arabidopsis thaliana
NHDNNNNN

NNNNNHDN
PBM
Weirauch et al.(2014)
pTH7183
0.583 0.583
DOF1.6
M06831_2.00
Arabidopsis thaliana
HYACTTTWNNN

NNNWAAAGTRD
Dap-seq
OMalley et al.(2016)
AT1G47655_col_a
0.583 0.583
DOF1.6
M06832_2.00
Arabidopsis thaliana
YYYTTDNCTTTWYBN

NVRWAAAGNHAARRR
Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a
0.583 0.583
DOF3.2
M06847_2.00
Arabidopsis thaliana
NYHVCTTTTTNNHHTHHNN

NNDDADDNNAAAAAGBDRN
Dap-seq
OMalley et al.(2016)
At3g45610_col_a
0.583 0.583
DOF3.2
M06848_2.00
Arabidopsis thaliana
NNHDDYHVCTTTTTB

VAAAAAGBDRHHDNN
Dap-seq
OMalley et al.(2016)
At3g45610_colamp_a
0.583 0.583
Dof2
M02674_2.00
Zea mays
NGCTTT

AAAGCN
SELEX
Mathelier et al.(2014)
MA0020.1
0.583 0.583
MNB1A
M02677_2.00
Zea mays
DCTTT

AAAGH
SELEX
Mathelier et al.(2014)
MA0053.1
0.583 0.583
MNB1A
M10440_2.00
Zea mays
NNDCTTTWNNN

NNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF1_01
0.583 0.583
Dof2
M10436_2.00
Zea mays
NNDCTTTWNND

HNNWAAAGHNN
Transfac
Matys et al.(2006)
P$DOF2_01
0.583 0.583
Dof2
M10437_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DOF_Q2
0.583 0.583
DOF5.3
M01947_2.00
Arabidopsis thaliana
CKTTNNN

NNNAAMG
PBM
Weirauch et al.(2014)
pTH7182
0.562 0.562
DOF5.6
M01063_2.00
Arabidopsis thaliana
NYDDWNNNN

NNNNWHHRN
PBM
Sullivan et al.(2014)
pTH7192
0.562 0.562
DOF5.6
M01950_2.00
Arabidopsis thaliana
NCKTTWNN

NNWAAMGN
PBM
Weirauch et al.(2014)
pTH7655
0.562 0.562
PK15337.1
M01219_2.00
Cannabis sativa
NCTTTHN

NDAAAGN
PBM
Lambert et al.(2019)
pTH10186
0.562 0.562
AT3G52440
M06852_2.00
Arabidopsis thaliana
DYHMCTTTWTN

NAWAAAGKDRH
Dap-seq
OMalley et al.(2016)
AT3G52440_col_a
0.562 0.562
AT3G52440
M06853_2.00
Arabidopsis thaliana
WWDDYHMCTTTTTNNHHYYWW

WWRRDDNNAAAAAGKDRHHWW
Dap-seq
OMalley et al.(2016)
AT3G52440_colamp_a
0.562 0.562
DOF5.6
M06867_2.00
Arabidopsis thaliana
HHTYHNCTTTTTNHHHHHHHH

DDDDDDDDNAAAAAGNDRADD
Dap-seq
OMalley et al.(2016)
At5g62940_col_a
0.562 0.562
PBF
M02675_2.00
Zea mays
RCTTT

AAAGY
SELEX
Mathelier et al.(2014)
MA0064.1
0.562 0.562
PBF
M10438_2.00
Zea mays
BBDCTTTWNWD

HWNWAAAGHVV
Transfac
Matys et al.(2006)
P$PBF_01
0.562 0.562
Q6RK62_WHEAT
M10441_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PBF_Q2_01
0.562 0.562
DOF2.5
M01212_2.00
Arabidopsis thaliana
NNNCKTTWNN

NNWAAMGNNN
PBM
Lambert et al.(2019)
pTH11562
0.542 0.542
DOF4.7
M01945_2.00
Arabidopsis thaliana
NCKTTHNNN

NNNDAAMGN
PBM
Weirauch et al.(2014)
pTH7189
0.542 0.542
DOF5.4
M01948_2.00
Arabidopsis thaliana
NDCGTTAWCN

NGWTAACGHN
PBM
Weirauch et al.(2014)
pTH7160
0.542 0.542
DOF5.4
M01949_2.00
Arabidopsis thaliana
NWACGTTWHNN

NNDWAACGTWN
PBM
Weirauch et al.(2014)
pTH7535
0.542 0.542
DOF5.7
M00862_2.00
Arabidopsis thaliana
NNNCKTTN

NAAMGNNN
PBM
Franco-Zorrilla et al.(2014)
Dof5.7
0.542 0.542
estExt_fgenesh1_pg.C_370003
M01954_2.00
Physcomitrella patens
NNNNHDNNNN

NNNNHDNNNN
PBM
Weirauch et al.(2014)
pTH8469
0.542 0.542
PK07031.1
M01216_2.00
Cannabis sativa
NCKTTHN

NDAAMGN
PBM
Lambert et al.(2019)
pTH11435
0.542 0.542
PK10955.1
M01217_2.00
Cannabis sativa
VCTTTWNN

NNWAAAGB
PBM
Lambert et al.(2019)
pTH10264
0.542 0.542
PK14080.1
M01218_2.00
Cannabis sativa
NCDTTHNN

NNDAAHGN
PBM
Lambert et al.(2019)
pTH10123
0.542 0.542
PK20317.1
M01221_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH11298
0.542 0.542
DOF1.7
M06833_2.00
Arabidopsis thaliana
HNNHWTYWNCTTTTYNHNHHN

NDDNDNRAAAAGNWRAWDNND
Dap-seq
OMalley et al.(2016)
Adof1_col_a
0.542 0.542
DOF1.7
M06834_2.00
Arabidopsis thaliana
NNHNNYWRCTTTTTNNHHNNH

DNNDDNNAAAAAGYWRNNDNN
Dap-seq
OMalley et al.(2016)
Adof1_colamp_a
0.542 0.542
DOF4.7
M06861_2.00
Arabidopsis thaliana
HHHHYHHHNHHHHHHHWWTWWCTTTTTN

NAAAAAGWWAWWDDDDDDDNDDDRDDDD
Dap-seq
OMalley et al.(2016)
At4g38000_col_a
0.542 0.542
DOF4.7
M06862_2.00
Arabidopsis thaliana
NYWACTTTWTB

VAWAAAGTWRN
Dap-seq
OMalley et al.(2016)
At4g38000_colamp_a
0.542 0.542
DOF5.8
M06868_2.00
Arabidopsis thaliana
HHNHHYHHHHYTTTHNCTTTTKNNHHNHW

WDNDDNNMAAAAGNDAAARDDDDRDDNDD
Dap-seq
OMalley et al.(2016)
AT5G66940_col_a
0.542 0.542
DOF5.8
M06869_2.00
Arabidopsis thaliana
NNHNDYWRCTTTTTNNHYHNH

DNDRDNNAAAAAGYWRHNDNN
Dap-seq
OMalley et al.(2016)
AT5G66940_colamp_a
0.542 0.542
DOF2.5
M06843_2.00
Arabidopsis thaliana
DYHMCTTTTTN

NAAAAAGKDRH
Dap-seq
OMalley et al.(2016)
DAG2_col_a
0.542 0.542
DOF2.5
M06844_2.00
Arabidopsis thaliana
HWDYHMCTTTTTN

NAAAAAGKDRHWD
Dap-seq
OMalley et al.(2016)
DAG2_colamp_a
0.542 0.542
DOF3.4
M06851_2.00
Arabidopsis thaliana
NNNHYHYHHHWYYHNCTTTWB

VWAAAGNDRRWDDDRDRDNNN
Dap-seq
OMalley et al.(2016)
OBP1_col_a
0.542 0.542
DOF5.4
M06865_2.00
Arabidopsis thaliana
DNWNYHMCTTTTTN

NAAAAAGKDRNWNH
Dap-seq
OMalley et al.(2016)
OBP4_col_a
0.542 0.542
DOF5.4
M06866_2.00
Arabidopsis thaliana
HWDYHVCTTTTTNNNHHNH

DNDDNNNAAAAAGBDRHWD
Dap-seq
OMalley et al.(2016)
OBP4_colamp_a
0.542 0.542
DOF2.4
M01940_2.00
Arabidopsis thaliana
NCKTTWN

NWAAMGN
PBM
Weirauch et al.(2014)
pTH7912
0.521 0.521
e_gw1.170.52.1
M01952_2.00
Physcomitrella patens
NNNCTTTHNN

NNDAAAGNNN
PBM
Weirauch et al.(2014)
pTH8464
0.521 0.521
e_gw1.392.16.1
M01953_2.00
Physcomitrella patens
NNCTTTWNN

NNWAAAGNN
PBM
Weirauch et al.(2014)
pTH8686
0.521 0.521
gw1.12.257.1
M01955_2.00
Physcomitrella patens
NNDDNNN

NNNHHNN
PBM
Weirauch et al.(2014)
pTH8651
0.521 0.521
gw1.385.26.1
M01956_2.00
Physcomitrella patens
NNNCKTTWNN

NNWAAMGNNN
PBM
Weirauch et al.(2014)
pTH8458
0.521 0.521
PK01144.1
M01213_2.00
Cannabis sativa
NCTTTWN

NWAAAGN
PBM
Lambert et al.(2019)
pTH10160
0.521 0.521
PK03929.1
M01214_2.00
Cannabis sativa
NNNCTTTWNN

NNWAAAGNNN
PBM
Lambert et al.(2019)
pTH10165
0.521 0.521
PK05671.1
M01215_2.00
Cannabis sativa
NCDWWNNN

NNNWWHGN
PBM
Lambert et al.(2019)
pTH10101
0.521 0.521
PK16340.1
M01220_2.00
Cannabis sativa
CKTTWNN

NNWAAMG
PBM
Lambert et al.(2019)
pTH10129
0.521 0.521
PK23763.1
M01224_2.00
Cannabis sativa
NNNCTTTWN

NWAAAGNNN
PBM
Lambert et al.(2019)
pTH10194
0.521 0.521
CDF5
M06837_2.00
Arabidopsis thaliana
HHWKYDCTTTTHHYTTTHYHYYWHNHH

DDNDWRRDRDAAARDDAAAAGHRMWDD
Dap-seq
OMalley et al.(2016)
AT1G69570_col_a
0.521 0.521
CDF5
M06838_2.00
Arabidopsis thaliana
YVCTTTTNNYTTWHHHBHBNN

NNVDVDDDWAARNNAAAAGBR
Dap-seq
OMalley et al.(2016)
AT1G69570_colamp_a
0.521 0.521
DOF2.2
M06839_2.00
Arabidopsis thaliana
HHHYHHHHYWTYHNCTTTTTN

NAAAAAGNDRAWRDDDDRDDD
Dap-seq
OMalley et al.(2016)
AT2G28810_col_a
0.521 0.521
DOF2.2
M06840_2.00
Arabidopsis thaliana
NYHNCTTTWTNNNHH

DDNNNAWAAAGNDRN
Dap-seq
OMalley et al.(2016)
AT2G28810_colamp_a
0.521 0.521
DOF5.1
M06863_2.00
Arabidopsis thaliana
HYHYWYHHHYTTWNCTTTTTN

NAAAAAGNWAARDDDRWRDRD
Dap-seq
OMalley et al.(2016)
AT5G02460_col_a
0.521 0.521
DOF5.1
M06864_2.00
Arabidopsis thaliana
NHDYHRCTTTWTNNHNNHN

NDNNDNNAWAAAGYDRHDN
Dap-seq
OMalley et al.(2016)
AT5G02460_colamp_a
0.521 0.521
DOF2.4
M06841_2.00
Arabidopsis thaliana
HHWWTTHMCTTTTTN

NAAAAAGKDAAWWDD
Dap-seq
OMalley et al.(2016)
dof24_col_a
0.521 0.521
DOF2.4
M06842_2.00
Arabidopsis thaliana
HHMCTTTWTNNNNHN

NDNNNNAWAAAGKDD
Dap-seq
OMalley et al.(2016)
dof24_colamp_a
0.521 0.521
DOF4.2
M06856_2.00
Arabidopsis thaliana
NNHWWWRCCTTTTTNNHNH

DNDNNAAAAAGGYWWWDNN
Dap-seq
OMalley et al.(2016)
dof42_col_a
0.521 0.521
DOF4.3
M06857_2.00
Arabidopsis thaliana
AAAGNYRCTTT

AAAGYRNCTTT
Dap-seq
OMalley et al.(2016)
dof43_col_a
0.521 0.521
DOF4.3
M06858_2.00
Arabidopsis thaliana
NWAAAGHRVCTTTW

WAAAGBYDCTTTWN
Dap-seq
OMalley et al.(2016)
dof43_colamp_a
0.521 0.521
OBP3
M06854_2.00
Arabidopsis thaliana
BTHWCTTTTYNHYTTYWYYHH

DDRRWRAARDNRAAAAGWDAV
Dap-seq
OMalley et al.(2016)
OBP3_col_a
0.521 0.521
OBP3
M06855_2.00
Arabidopsis thaliana
NHNWHNHHNYWNCTTTTYN

NRAAAAGNWRNDDNDWNDN
Dap-seq
OMalley et al.(2016)
OBP3_colamp_a
0.521 0.521
Dof3
M02676_2.00
Zea mays
BRCTTT

AAAGYV
SELEX
Mathelier et al.(2014)
MA0021.1
0.521 0.521
Dof3
M10439_2.00
Zea mays
NBNCTTTNNBN

NVNNAAAGNVN
Transfac
Matys et al.(2006)
P$DOF3_01
0.521 0.521
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ11189 Dof 12 59

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LjSGA_111604.1.1 Lotus japonicus LjSGA_111604.1.1 I 0.593
Traes_5DL_04A93DD74 Triticum aestivum Traes_5DL_04A93DD74 I 0.565
Traes_5AL_1EA22121D Triticum aestivum Traes_5AL_1EA22121D I 0.550
Traes_3DS_72524290F Triticum aestivum Traes_3DS_72524290F I 0.542
Traes_3AS_1DEBF1E8B Triticum aestivum Traes_3AS_1DEBF1E8B I 0.542
Traes_3AL_3FD608E1A Triticum aestivum Traes_3AL_3FD608E1A I 0.538
Traes_2BL_4611C1667 Triticum aestivum Traes_2BL_4611C1667 I 0.543
Traes_2AL_E93926EE7 Triticum aestivum Traes_2AL_E93926EE7 I 0.556
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.593
Traes_1BL_0DFC787A9 Triticum aestivum Traes_1BL_0DFC787A9 I 0.565
TCM_029918 Theobroma cacao TCM_029918 I 0.604
Solyc09g010680.2 Solanum lycopersicum Solyc09g010680.2 I 0.562
SELMODRAFT_9042 Selaginella moellendorffii SELMODRAFT_9042 I 0.532
SELMODRAFT_410014 Selaginella moellendorffii SELMODRAFT_410014 I 0.521
SELMODRAFT_19633 Selaginella moellendorffii SELMODRAFT_19633 I 0.979
SELMODRAFT_19631 Selaginella moellendorffii SELMODRAFT_19631 I 0.917
Sb03g003050 Sorghum bicolor Sb03g003050 I 0.583
Traes_6AL_065306054 Triticum aestivum Traes_6AL_065306054 I 0.583
Traes_6DL_EF6D5D4FA Triticum aestivum Traes_6DL_EF6D5D4FA I 0.583
TRIUR3_22971 Triticum urartu TRIUR3_22971 I 0.542
SapurV1A.0753s0070 Salix purpurea SapurV1A.0753s0070 I 0.521
Pavir.Ba01771 Panicum virgatum Pavir.Ba01771 I 0.583
MDP0000241840 Malus domestica MDP0000241840 I 0.542
Lus10035955.g Linum usitatissimum Lus10035955.g I 0.542
Lus10025707.g Linum usitatissimum Lus10025707.g I 0.542
Gorai.012G103400 Gossypium raimondii Gorai.012G103400 I 0.542
Gorai.010G152100 Gossypium raimondii Gorai.010G152100 I 0.508
Gorai.009G168300 Gossypium raimondii Gorai.009G168300 I 0.542
Gorai.001G129500 Gossypium raimondii Gorai.001G129500 I 0.508
Eucgr.E03261 Eucalyptus grandis Eucgr.E03261 I 0.562
Carubv10011378m.g Capsella rubella Carubv10011378m.g I 0.542
Bostr.10689s0053 Boechera stricta Bostr.10689s0053 I 0.521
mgf021408m Mimulus guttatus mgf021408m I 0.508
29851.m002375 Ricinus communis 29851.m002375 I 0.517
Cla014311 Citrullus lanatus Cla014311 I 0.542
VIT_00s0652g00010 Vitis vinifera VIT_00s0652g00010 I 0.508
POPTR_0013s06290 Populus trichocarpa POPTR_0013s06290 I 0.521
POPTR_0011s04730 Populus trichocarpa POPTR_0011s04730 I 0.517
MLOC_65231 Hordeum vulgare MLOC_65231 I 0.588
LPERR05G00880 Leersia perrieri LPERR05G00880 I 0.542
GSMUA_Achr8G02600_001 Musa acuminata GSMUA_Achr8G02600_001 I 0.583
GSMUA_Achr10G18770_001 Musa acuminata GSMUA_Achr10G18770_001 I 0.542
GRMZM2G144188 Zea mays GRMZM2G144188 I 0.607
GRMZM2G131897 Zea mays GRMZM2G131897 I 0.521
GLYMA15G08860 Glycine max GLYMA15G08860 I 0.521
GLYMA15G04980 Glycine max GLYMA15G04980 I 0.508
GLYMA06G12950 Glycine max GLYMA06G12950 I 0.583
GLYMA05G02220 Glycine max GLYMA05G02220 I 0.542
GLYMA04G41830 Glycine max GLYMA04G41830 I 0.583
F775_09091 Aegilops tauschii F775_09091 I 0.542
Bra028872 Brassica rapa Bra028872 I 0.521
Bra013496 Brassica rapa Bra013496 I 0.553
BGIOSGA018944 Oryza indica BGIOSGA018944 I 0.542
AMTR_s00036p00232310 Amborella trichopoda AMTR_s00036p00232310 I 0.521
MLOC_69454 Hordeum vulgare MLOC_69454 I 0.522
MLOC_72873 Hordeum vulgare MLOC_72873 I 0.529
MLOC_73724 Hordeum vulgare MLOC_73724 I 0.583
POPTR_0002s13100 Populus trichocarpa POPTR_0002s13100 I 0.508
PGSC0003DMG400023426 Solanum tuberosum PGSC0003DMG400023426 I 0.542
OS12G0590700 Oryza sativa OS12G0590700 I 0.545
OS05G0112200 Oryza sativa OS05G0112200 I 0.542
ORUFI03G27150 Oryza rufipogon ORUFI03G27150 I 0.519
ORGLA05G0009500 Oryza glaberrima ORGLA05G0009500 I 0.542
OPUNC05G00830 Oryza punctata OPUNC05G00830 I 0.542
OPUNC01G26100 Oryza punctata OPUNC01G26100 I 0.536
ONIVA05G00860 Oryza nivara ONIVA05G00860 I 0.542
OGLUM05G00930 Oryza glumaepatula OGLUM05G00930 I 0.542
OGLUM01G30020 Oryza glumaepatula OGLUM01G30020 I 0.577
OBART10G09450 Oryza barthii OBART10G09450 I 0.552
OBART05G00910 Oryza barthii OBART05G00910 I 0.542
OBART02G29600 Oryza barthii OBART02G29600 I 0.523
MTR_2g059540 Medicago truncatula MTR_2g059540 I 0.542
MLOC_79421 Hordeum vulgare MLOC_79421 I 0.542
AMTR_s00021p00057700 Amborella trichopoda AMTR_s00021p00057700 I 0.521