Afo_R002906 (Aptenodytes forsteri)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Afo_R002906 T174791_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
EBF3
M10461_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.891 0.891
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV

BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.842 0.842
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA

TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.842 0.842
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB

VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.842 0.842
Ebf2
M10467_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.796 0.796
Ebf4
M10468_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.769 0.769
EBF4
M10460_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002906 EBF1 17 238

Links

Other EBF1 family TFs
Other Aptenodytes forsteri TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.928
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.769
ENSAMEG00000000326 Ailuropoda melanoleuca ENSAMEG00000000326 I 0.801
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.848
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 1.000
Alligator_sinensis_CCG006299.1 Alligator sinensis Alligator_sinensis_CCG006299.1 I 0.700
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.791
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.801
ENSAPLG00000012647 Anas platyrhynchos ENSAPLG00000012647 I 0.726
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.887
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.940
AALB010330 Anopheles albimanus AALB010330 I 0.786
AATE014419 Anopheles atroparvus AATE014419 I 0.781
ACOM041529 Anopheles coluzzii ACOM041529 I 0.836
ACUA010350 Anopheles culicifacies ACUA010350 I 0.821
ADAC003479 Anopheles darlingi ADAC003479 I 0.703
AGAP011437 Anopheles gambiae AGAP011437 I 0.706
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.837
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.940
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.801
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.984
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.740
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.819
ENSAMXG00000006585 Astyanax mexicanus ENSAMXG00000006585 I 0.840
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.714
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.740
ENSBTAP00000053340-D3 Bos grunniens ENSBTAP00000053340-D3 I 0.719
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.736
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.747
EBF1 Bos taurus ENSBTAG00000037508 I 0.805
EBF4 Bos taurus ENSBTAG00000037757 I 0.769
EBF2 Bos taurus ENSBTAG00000040390 I 0.801
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 1.000
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I 0.814
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.914
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.940
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.847
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.805
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.795
Aan_R007097 Calypte anna Aan_R007097 I 0.867
Aan_R009520 Calypte anna Aan_R009520 I 0.788
EBF2 Canis familiaris ENSCAFG00000008918 I 0.801
EBF4 Canis familiaris ENSCAFG00000006631 I 0.769
EBF1 Canis familiaris ENSCAFG00000017318 I 0.828
CapteG93575 Capitella teleta CapteG93575 I 0.706
EBF1 Cavia porcellus ENSCPOG00000026184 I 0.792
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.755
EBF3 Cavia porcellus ENSCPOG00000005096 I 0.822
EBF2 Cavia porcellus ENSCPOG00000001463 I 0.805
Cmyd_10020950 Chelonia mydas Cmyd_10020950 I 0.891
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.710
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.798
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.706
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.727
ebf3a Danio rerio ENSDARG00000100244 I 0.840
ebf1a Danio rerio ENSDARG00000099849 I 0.819
ebf1b Danio rerio ENSDARG00000069196 I 0.810
ebf3b Danio rerio ENSDARG00000091287 I 0.700
ebf2 Danio rerio ENSDARG00000042525 I 0.733
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 1.000
EBF2 Dasypus novemcinctus ENSDNOG00000040488 I 0.801
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.721
GH12956 Drosophila grimshawi FBgn0120434 I 0.825
EBF1 Echinops telfairi ENSETEG00000011711 I 0.805
EBF3 Echinops telfairi ENSETEG00000014060 I 0.733
EBF2 Equus caballus ENSECAG00000014179 I 0.766
EBF1 Equus caballus ENSECAG00000007964 I 1.000
EBF4 Equus caballus ENSECAG00000010003 I 0.732
EBF1 Felis catus ENSFCAG00000008547 I 0.780
ENSFALG00000001212 Ficedula albicollis ENSFALG00000001212 I 0.891
ENSFALG00000008502 Ficedula albicollis ENSFALG00000008502 I 0.797
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.801
ENSGMOG00000016636 Gadus morhua ENSGMOG00000016636 I 0.837
ENSGMOG00000015541 Gadus morhua ENSGMOG00000015541 I 0.810
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 1.000
EBF1 Gallus gallus ENSGALG00000003699 I 0.797
EBF2 Gallus gallus ENSGALG00000000242 I 0.801
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.774
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.837
ENSGACG00000010053 Gasterosteus aculeatus ENSGACG00000010053 I 0.814
EBF4 Gasterosteus aculeatus ENSGACG00000016862 I 0.745
EBF1 Gasterosteus aculeatus ENSGACG00000018450 I 0.771
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.710
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.940
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.788
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.769
EBF2 Gorilla gorilla ENSGGOG00000001585 I 0.801
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.853
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
EBF4 Homo sapiens ENSG00000088881 D 0.780
EBF3 Homo sapiens ENSG00000108001 D 0.891
EBF1 Homo sapiens ENSG00000164330 D 0.805
EBF2 Homo sapiens ENSG00000221818 D 0.801
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.765
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.716
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.783
ENSLOCG00000007615 Lepisosteus oculatus ENSLOCG00000007615 I 0.882
ENSLOCG00000015225 Lepisosteus oculatus ENSLOCG00000015225 I 0.745
ENSLOCG00000001693 Lepisosteus oculatus ENSLOCG00000001693 I 0.792
ENSLOCG00000009282 Lepisosteus oculatus ENSLOCG00000009282 I 0.792
LotgiG225788 Lottia gigantea LotgiG225788 I 0.706
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.837
EBF2 Loxodonta africana ENSLAFG00000022465 I 0.801
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.841
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.853
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.733
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.853
EBF3 Macaca mulatta ENSMMUG00000011447 I 0.891
EBF4 Macaca mulatta ENSMMUG00000021331 I 1.000
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.791
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.801
MCINX016126 Melitaea cinxia MCINX016126 I 0.825
EBF1 Microcebus murinus ENSMICG00000010036 I 0.733
EBF3 Microcebus murinus ENSMICG00000008536 I 0.847
EBF4 Monodelphis domestica ENSMODG00000005256 I 0.762
EBF1 Monodelphis domestica ENSMODG00000008198 I 0.805
ENSMPUG00000003195 Mustela putorius furo ENSMPUG00000003195 I 0.801
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.769
Ebf2 Mus musculus ENSMUSG00000022053 D 0.796
Ebf4 Mus musculus ENSMUSG00000053552 D 0.769
Ebf1 Mus musculus ENSMUSG00000057098 D 0.805
Ebf3 Mus musculus ENSMUSG00000010476 I 0.891
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 1.000
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.738
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.946
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.928
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.796
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.769
ENSNLEG00000016189 Nomascus leucogenys ENSNLEG00000016189 I 0.801
ENSNLEG00000001518 Nomascus leucogenys ENSNLEG00000001518 I 0.833
ENSNLEG00000004218 Nomascus leucogenys ENSNLEG00000004218 I 0.774
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.701
ENSONIG00000019141 Oreochromis niloticus ENSONIG00000019141 I 0.792
ENSONIG00000008631 Oreochromis niloticus ENSONIG00000008631 I 0.783
ENSONIG00000000451 Oreochromis niloticus ENSONIG00000000451 I 0.842
ENSONIG00000004376 Oreochromis niloticus ENSONIG00000004376 I 0.792
ENSONIG00000013342 Oreochromis niloticus ENSONIG00000013342 I 0.749
ENSONIG00000017655 Oreochromis niloticus ENSONIG00000017655 I 0.819
EBF3 Ornithorhynchus anatinus ENSOANG00000012326 I 0.729
EBF1 Ornithorhynchus anatinus ENSOANG00000012338 I 0.805
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.798
EBF1 Oryctolagus cuniculus ENSOCUG00000008985 I 0.792
EBF2 Oryctolagus cuniculus ENSOCUG00000011972 I 0.801
EBF4 Oryctolagus cuniculus ENSOCUG00000023917 I 0.774
EBF1 Oryzias latipes ENSORLG00000007471 I 0.819
ebf2 Oryzias latipes ENSORLG00000006408 I 0.745
ebf3a Oryzias latipes ENSORLG00000005870 I 0.842
EBF1 Oryzias latipes ENSORLG00000002342 I 0.783
EBF4 Oryzias latipes ENSORLG00000020414 I 0.828
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.736
EBF3 Otolemur garnettii ENSOGAG00000007572 I 0.891
EBF2 Otolemur garnettii ENSOGAG00000010783 I 0.801
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.920
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.729
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.801
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.734
EBF1 Pan troglodytes ENSPTRG00000017477 I 0.805
EBF2 Pan troglodytes ENSPTRG00000003058 I 0.801
ENSPANG00000020231 Papio anubis ENSPANG00000020231 I 0.801
ENSPANG00000020188 Papio anubis ENSPANG00000020188 I 0.828
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 1.000
ENSPSIG00000016837 Pelodiscus sinensis ENSPSIG00000016837 I 0.792
ENSPSIG00000016691 Pelodiscus sinensis ENSPSIG00000016691 I 0.891
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.984
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.732
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.828
ENSPFOG00000009617 Poecilia formosa ENSPFOG00000009617 I 0.783
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.710
ENSPFOG00000000294 Poecilia formosa ENSPFOG00000000294 I 0.819
ENSPFOG00000017183 Poecilia formosa ENSPFOG00000017183 I 0.842
Pvit_12046 Pogona vitticeps Pvit_12046 I 1.000
Pvit_12666 Pogona vitticeps Pvit_12666 I 1.000
Pvit_16838 Pogona vitticeps Pvit_16838 I 0.766
ENSPPYG00000018454 Pongo abelii ENSPPYG00000018454 I 0.801
ENSPPYG00000015995 Pongo abelii ENSPPYG00000015995 I 0.805
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.769
ENSPPYG00000002766 Pongo abelii ENSPPYG00000002766 I 0.864
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.703
EBF1 Procavia capensis ENSPCAG00000013495 I 0.714
EBF2 Pteropus vampyrus ENSPVAG00000024254 I 0.758
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.805
Ebf2 Rattus norvegicus ENSRNOG00000011548 I 0.801
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.737
Ebf3 Rattus norvegicus ENSRNOG00000016102 I 0.891
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.952
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.796
EBF2 Sus scrofa ENSSSCG00000009655 I 0.801
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.734
ENSSSCG00000010757 Sus scrofa ENSSSCG00000010757 I 0.853
EBF3 Taeniopygia guttata ENSTGUG00000011600 I 0.891
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.801
EBF1 Taeniopygia guttata ENSTGUG00000000593 I 0.805
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.774
EBF1 Takifugu rubripes ENSTRUG00000013805 I 0.766
EBF1 Takifugu rubripes ENSTRUG00000009320 I 0.814
ebf3a Takifugu rubripes ENSTRUG00000005721 I 0.805
ebf2 Tetraodon nigroviridis ENSTNIG00000015845 I 0.774
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.840
EBF1 Tursiops truncatus ENSTTRG00000009929 I 0.774
EBF3 Tursiops truncatus ENSTTRG00000014010 I 0.887
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.765
Tal_R004164 Tyto alba Tal_R004164 I 0.940
ebf3.L Xenopus laevis XB-GENE-962547 I 0.831
ebf2.S Xenopus laevis XB-GENE-971141 I 0.783
ebf2.L Xenopus laevis XB-GENE-6252857 I 0.758
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.840
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.819
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.796
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.828
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.968
ENSXMAG00000010668 Xiphophorus maculatus ENSXMAG00000010668 I 0.751
ENSXMAG00000012715 Xiphophorus maculatus ENSXMAG00000012715 I 0.842
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.774
ENSXMAG00000000489 Xiphophorus maculatus ENSXMAG00000000489 I 0.757