CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nRc.2.0.1.g14013
(
Romanomermis culicivorax
)
EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF16422 (COE1_DBD)
(none)
nRc.2.0.1.g14013
T174951_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ebf2
M10467_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_01
0.825
0.825
EBF2
M10466_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COE2_02
0.825
0.825
Ebf1
M09045_2.00
Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH
Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A
0.800
0.800
Ebf1
M09527_2.00
Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH
Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978
0.800
0.800
Ebf4
M10468_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_01
0.800
0.800
EBF4
M10460_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF4_02
0.800
0.800
EBF3
M10461_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EBF_Q6
0.800
0.800
Ebf1
M10469_2.00
Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB
Transfac
Matys et al.(2006)
V$OLF1_01
0.800
0.800
kn
M03721_2.00
Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV
SELEX
Nitta et al.(2015)
kn_1
0.750
0.750
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t14013-RA
EBF1
1
40
MRRFQVVLTTTPRVDGQLLAVSENMFVHNNSKHGRRSRRL
Links
Other
EBF1
family TFs
Other
Romanomermis culicivorax
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EBF4
Macaca mulatta
ENSMMUG00000021331
I
0.938
estExt_gwp.C_3380002
Branchiostoma floridae
estExt_gwp.C_3380002
I
0.938
Pvit_12666
Pogona vitticeps
Pvit_12666
I
0.938
L898_g8304
Steinernema monticolum
L898_g8304
I
0.875
L889_g1820
Steinernema feltiae
L889_g1820
I
0.875
EBF2
Myotis lucifugus
ENSMLUG00000011509
I
0.825
Alligator_sinensis_CCG017609.1
Alligator sinensis
Alligator_sinensis_CCG017609.1
I
0.825
ENSBTAP00000053340-D3
Bos grunniens
ENSBTAP00000053340-D3
I
0.825
EBF2
Gallus gallus
ENSGALG00000000242
I
0.825
Afo_R003215
Aptenodytes forsteri
Afo_R003215
I
0.825
EBF2
Meleagris gallopavo
ENSMGAG00000000791
I
0.825
ENSFALG00000011234
Ficedula albicollis
ENSFALG00000011234
I
0.825
ENSLACG00000017271
Latimeria chalumnae
ENSLACG00000017271
I
0.825
EBF2
Taeniopygia guttata
ENSTGUG00000004267
I
0.825
ebf2
Xenopus tropicalis
XB-GENE-971136
I
0.825
ebf2.S
Xenopus laevis
XB-GENE-971141
I
0.825
ENSAPLG00000009260
Anas platyrhynchos
ENSAPLG00000009260
I
0.825
ENSSTOG00000007966
Ictidomys tridecemlineatus
ENSSTOG00000007966
I
0.825
ENSOANG00000004212
Ornithorhynchus anatinus
ENSOANG00000004212
I
0.825
OESDEN_10293
Oesophagostomum dentatum
OESDEN_10293
I
0.825
Hba_09581
Heterorhabditis bacteriophora
Hba_09581
I
0.812
ebf2
Takifugu rubripes
ENSTRUG00000011528
I
0.800
ENSSHAG00000017239
Sarcophilus harrisii
ENSSHAG00000017239
I
0.800
ENSXMAG00000006633
Xiphophorus maculatus
ENSXMAG00000006633
I
0.800
SPU_004702
Strongylocentrotus purpuratus
SPU_004702
I
0.800
ENSSHAG00000000353
Sarcophilus harrisii
ENSSHAG00000000353
I
0.800
EBF4
Tursiops truncatus
ENSTTRG00000003459
I
0.800
EBF1
Tupaia belangeri
ENSTBEG00000007800
I
0.800
ENSP00000347463-D1
Bos grunniens
ENSP00000347463-D1
I
0.800
ebf4
Xenopus tropicalis
XB-GENE-6030626
I
0.800
nDi.2.2.2.g04990
Dirofilaria immitis
nDi.2.2.2.g04990
I
0.800
nRc.2.0.1.g06532
Romanomermis culicivorax
nRc.2.0.1.g06532
I
0.800
OFLC_0000294401
Onchocerca flexuosa
OFLC_0000294401
I
0.800
Pvit_12046
Pogona vitticeps
Pvit_12046
I
0.800
Pvit_11383
Pogona vitticeps
Pvit_11383
I
0.800
Alligator_sinensis_CCG000393.1
Alligator sinensis
Alligator_sinensis_CCG000393.1
I
0.800
EBF4
Pteropus vampyrus
ENSPVAG00000006830
I
0.800
ENSP00000405003
Macaca fascicularis
ENSP00000405003
I
0.800
Myotis_brandtii_Ebf1_10034833
Myotis brandtii
Myotis_brandtii_Ebf1_10034833
I
0.800
Aan_R013029
Calypte anna
Aan_R013029
I
0.800
ENSXMAG00000017859
Xiphophorus maculatus
ENSXMAG00000017859
I
0.800
ENSCSAG00000010974
Chlorocebus sabaeus
ENSCSAG00000010974
I
0.800
ENSFCAG00000027202
Felis catus
ENSFCAG00000027202
I
0.800
ENSCSAG00000010520
Chlorocebus sabaeus
ENSCSAG00000010520
I
0.800
EBF1
Dasypus novemcinctus
ENSDNOG00000035396
I
0.800
EBF1
Equus caballus
ENSECAG00000007964
I
0.800
EBF1
Homo sapiens
ENSG00000164330
D
0.800
ebf2
Gasterosteus aculeatus
ENSGACG00000008451
I
0.800
EBF3
Dasypus novemcinctus
ENSDNOG00000002588
I
0.800
ENSLACG00000005494
Latimeria chalumnae
ENSLACG00000005494
I
0.800
EBF1
Loxodonta africana
ENSLAFG00000017522
I
0.800
ENSMGAG00000016563
Meleagris gallopavo
ENSMGAG00000016563
I
0.800
EBF3
Canis familiaris
ENSCAFG00000013267
I
0.800
EBF3
Bos taurus
ENSBTAG00000008272
I
0.800
ENSNLEG00000009110
Nomascus leucogenys
ENSNLEG00000009110
I
0.800
Ebf4
Mus musculus
ENSMUSG00000053552
D
0.800
ENSOARG00000012836
Ovis aries
ENSOARG00000012836
I
0.800
ENSPANG00000010656
Papio anubis
ENSPANG00000010656
I
0.800
ENSPFOG00000002559
Poecilia formosa
ENSPFOG00000002559
I
0.800
ebf3a
Gasterosteus aculeatus
ENSGACG00000009548
I
0.800
ENSMPUG00000013414
Mustela putorius furo
ENSMPUG00000013414
I
0.800
EBF3
Anolis carolinensis
ENSACAG00000008590
I
0.800
ENSAMXG00000003402
Astyanax mexicanus
ENSAMXG00000003402
I
0.800
EBF3
Myotis lucifugus
ENSMLUG00000005478
I
0.800
ENSMPUG00000002449
Mustela putorius furo
ENSMPUG00000002449
I
0.800
HMEL014948
Heliconius melpomene
HMEL014948
I
0.786
BGIBMGA011565
Bombyx mori
BGIBMGA011565
I
0.786
BTMF_0000130101
Brugia timori
BTMF_0000130101
I
0.783
GPLIN_000159400
Globodera pallida
GPLIN_000159400
I
0.775
ENSCING00000003209
Ciona intestinalis
ENSCING00000003209
I
0.775
SMU15024001
Schmidtea mediterranea
SMU15024001
I
0.775
ENSCSAVG00000000458
Ciona savignyi
ENSCSAVG00000000458
I
0.775
ebf1b
Danio rerio
ENSDARG00000069196
I
0.775
EBF1
Gasterosteus aculeatus
ENSGACG00000020458
I
0.775
AMIN008984
Anopheles minimus
AMIN008984
I
0.750
ASIS004664
Anopheles sinensis
ASIS004664
I
0.750
AFUN004906
Anopheles funestus
AFUN004906
I
0.750
AFAF000230
Anopheles farauti
AFAF000230
I
0.750
ADIR000236
Anopheles dirus
ADIR000236
I
0.750
ACHR004409
Anopheles christyi
ACHR004409
I
0.750
Hsal_03263--XP_394171.3_APIME
Harpegnathos saltator
Hsal_03263--XP_394171.3_APIME
I
0.750
GH12956
Drosophila grimshawi
FBgn0120434
I
0.750
GF11778
Drosophila ananassae
FBgn0088818
I
0.750
GA24435
Drosophila pseudoobscura
FBgn0245832
I
0.750
GL10656
Drosophila persimilis
FBgn0148266
I
0.750
GJ21945
Drosophila virilis
FBgn0209060
I
0.750
KGM_09934
Danaus plexippus
KGM_09934
I
0.750
ACEP22947
Atta cephalotes
ACEP22947
I
0.750
EBF1
Tetraodon nigroviridis
ENSTNIG00000016148
I
0.750
GK23295
Drosophila willistoni
FBgn0225257
I
0.750
Cflo_00077--XP_394171.3_APIME
Camponotus floridanus
Cflo_00077--XP_394171.3_APIME
I
0.750
MCINX016126
Melitaea cinxia
MCINX016126
I
0.750
Myotis_brandtii_Ebf3_10024819
Myotis brandtii
Myotis_brandtii_Ebf3_10024819
I
0.730
scaffold24-EXSNAP2012.58
Pristionchus exspectatus
scaffold24-EXSNAP2012.58
I
0.730
DILT_0000082701
Diphyllobothrium latum
DILT_0000082701
I
0.725
LCUP013862
Lucilia cuprina
LCUP013862
I
0.725
MDOA011385
Musca domestica
MDOA011385
I
0.725
CJA00446
Caenorhabditis japonica
CJA00446
I
0.722
EBF1
Callithrix jacchus
ENSCJAG00000019016
I
0.700
TTAC_0000009401
Hydatigera taeniaeformis
TTAC_0000009401
I
0.700
ENSPMAG00000004238
Petromyzon marinus
ENSPMAG00000004238
I
0.700
LotgiG225788
Lottia gigantea
LotgiG225788
I
0.700
HelroG112029
Helobdella robusta
HelroG112029
I
0.700
EmuJ_001076400
Echinococcus multilocularis
EmuJ_001076400
I
0.700