EBF1 (Tetraodon nigroviridis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSTNIG00000016148 T174710_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.940 0.940
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.940 0.940
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.940 0.940
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.940 0.940
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.918 0.918
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.918 0.918
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.896 0.896
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.843 0.843
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000019239 EBF1 1 134

Links

Other EBF1 family TFs
Other Tetraodon nigroviridis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EBF4 Macaca mulatta ENSMMUG00000021331 I 1.000
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 1.000
Pvit_12666 Pogona vitticeps Pvit_12666 I 1.000
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 1.000
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.991
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.984
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.968
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.966
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.966
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.966
EBF3 Canis familiaris ENSCAFG00000013267 I 0.966
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.965
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.965
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.964
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.964
EBF1 Homo sapiens ENSG00000164330 D 0.952
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.952
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.952
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.952
ENSFCAG00000027202 Felis catus ENSFCAG00000027202 I 0.952
Aan_R013029 Calypte anna Aan_R013029 I 0.952
EBF3 Bos taurus ENSBTAG00000008272 I 0.952
EBF4 Homo sapiens ENSG00000088881 D 0.949
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.941
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.938
SINV26263 Solenopsis invicta SINV26263 I 0.938
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.937
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.933
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.933
EBF2 Homo sapiens ENSG00000221818 D 0.929
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.929
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.925
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.925
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.925
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.925
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.925
EBF1 Equus caballus ENSECAG00000007964 I 0.925
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.923
EBF3 Gallus gallus ENSGALG00000010461 I 0.922
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.921
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.921
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.920
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.918
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.909
LCUP013862 Lucilia cuprina LCUP013862 I 0.908
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.903
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.901
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.900
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.900
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.899
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.898
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.896
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.896
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.896
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.896
Tal_R004164 Tyto alba Tal_R004164 I 0.896
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.889
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.884
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.884
EBF1 Sus scrofa ENSSSCG00000017046 I 0.884
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.884
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.881
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.871
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.870
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.869
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.865
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.865
EBF1 Tupaia belangeri ENSTBEG00000007800 I 0.840
EBF3 Microcebus murinus ENSMICG00000008536 I 0.840
EBF3 Callithrix jacchus ENSCJAG00000014357 I 0.840
ENSP00000347463 Macaca fascicularis ENSP00000347463 I 0.834
LotgiG225788 Lottia gigantea LotgiG225788 I 0.828
HelroG112029 Helobdella robusta HelroG112029 I 0.828
ACEP22947 Atta cephalotes ACEP22947 I 0.825
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.825
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.825
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.825
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.822
ENSPMAG00000004238 Petromyzon marinus ENSPMAG00000004238 I 0.821
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.813
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.813
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.813
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.813
ASIS004664 Anopheles sinensis ASIS004664 I 0.812
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.809
ACOM041529 Anopheles coluzzii ACOM041529 I 0.806
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.806
RPRC005513 Rhodnius prolixus RPRC005513 I 0.804
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.800
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.796
Cmyd_10009821 Chelonia mydas Cmyd_10009821 I 0.791
ACUA010350 Anopheles culicifacies ACUA010350 I 0.791
AFUN004906 Anopheles funestus AFUN004906 I 0.791
PXEA_0001364901 Protopolystoma xenopodis PXEA_0001364901 I 0.789
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.783
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.783
HNAJ_0001308901 Hymenolepis nana HNAJ_0001308901 I 0.779
MCINX016126 Melitaea cinxia MCINX016126 I 0.775
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I 0.775
GH12956 Drosophila grimshawi FBgn0120434 I 0.775
Sjc_0015600 Schistosoma japonicum Sjc_0015600 I 0.774
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.773
ACHR004409 Anopheles christyi ACHR004409 I 0.765
ENSTSYG00000019489 Tarsius syrichta ENSTSYG00000019489 I 0.764
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I 0.758
AALB010330 Anopheles albimanus AALB010330 I 0.757
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I 0.756
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.754
AATE014419 Anopheles atroparvus AATE014419 I 0.753
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.750
HMEL014948 Heliconius melpomene HMEL014948 I 0.750
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.750
EBF4 Loxodonta africana ENSLAFG00000006892 I 0.750
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.746
EBF3 Tupaia belangeri ENSTBEG00000005858 I 0.746
AEPI003553 Anopheles epiroticus AEPI003553 I 0.746
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I 0.744
Myotis_brandtii_EBF2_10005813 Myotis brandtii Myotis_brandtii_EBF2_10005813 I 0.744
AMEC016105 Anopheles melas AMEC016105 I 0.743
AMEM017983 Anopheles merus AMEM017983 I 0.743
SNAPOd2T00017027001 Oikopleura dioica SNAPOd2T00017027001 I 0.736
maker-nMf.1.1.scaf01942-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01942-snap-gene-0.10 I 0.728
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.727
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.717
ENSOARG00000009825 Ovis aries ENSOARG00000009825 I 0.716
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.712
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.707
AQUA007473 Anopheles quadriannulatus AQUA007473 I 0.707
AARA002865 Anopheles arabiensis AARA002865 I 0.707
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.707
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.700