Sjc_0015600 (Schistosoma japonicum)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Sjc_0015600 T174851_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.783 0.783
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.774 0.774
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.765 0.765
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.765 0.765
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.757 0.757
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.757 0.757
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.757 0.757
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.757 0.757
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000001459 EBF1 4 118

Links

Other EBF1 family TFs
Other Schistosoma japonicum TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMTD_0000506301 Schistosoma mattheei SMTD_0000506301 N 0.946
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.926
csin100403 Clonorchis sinensis csin100403 N 0.878
T265_13606 Opisthorchis viverrini T265_13606 N 0.878
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.875
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.875
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.875
Smp_194660 Schistosoma mansoni Smp_194660 N 0.875
SINV26263 Solenopsis invicta SINV26263 I 0.875
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.845
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.826
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.812
LotgiG225788 Lottia gigantea LotgiG225788 I 0.809
HelroG112029 Helobdella robusta HelroG112029 I 0.809
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.800
EBF2 Homo sapiens ENSG00000221818 D 0.796
LLOJ000215 Lutzomyia longipalpis LLOJ000215 I 0.796
ENSCSAG00000016068 Chlorocebus sabaeus ENSCSAG00000016068 I 0.796
EBF1 Meleagris gallopavo ENSMGAG00000004896 I 0.791
ENSAPLG00000015476 Anas platyrhynchos ENSAPLG00000015476 I 0.791
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.788
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.784
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.784
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.783
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.783
MDOA011385 Musca domestica MDOA011385 I 0.783
GJ21945 Drosophila virilis FBgn0209060 I 0.783
ENSPFOG00000007531 Poecilia formosa ENSPFOG00000007531 I 0.781
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.774
ebf1b Danio rerio ENSDARG00000069196 I 0.774
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.774
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.774
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.774
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.774
ebf2.S Xenopus laevis XB-GENE-971141 I 0.774
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.773
EBF3 Canis familiaris ENSCAFG00000013267 I 0.773
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.773
RPRC005513 Rhodnius prolixus RPRC005513 I 0.768
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.765
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.765
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.765
EBF2 Gallus gallus ENSGALG00000000242 I 0.765
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.765
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.765
Ebf4 Mus musculus ENSMUSG00000053552 D 0.765
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.765
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.765
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.765
EBF3 Oryctolagus cuniculus ENSOCUG00000008915 I 0.763
ENSCSAG00000004432 Chlorocebus sabaeus ENSCSAG00000004432 I 0.763
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.762
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.762
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.757
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.757
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.757
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.757
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.757
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.757
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.754
EBF3 Gallus gallus ENSGALG00000010461 I 0.750
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.750
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.746
EBF4 Homo sapiens ENSG00000088881 D 0.746
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.742
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.742
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.739
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.739
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.735
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.735
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.734
AFUN004906 Anopheles funestus AFUN004906 I 0.731
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.727
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.726
EmuJ_001076400 Echinococcus multilocularis EmuJ_001076400 I 0.725
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.725
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.722
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.716
Tal_R004164 Tyto alba Tal_R004164 I 0.716
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.716
ACUA010350 Anopheles culicifacies ACUA010350 I 0.716
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.716
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.710
EBF1 Sus scrofa ENSSSCG00000017046 I 0.710
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.710
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.710
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.710
ACHR004409 Anopheles christyi ACHR004409 I 0.706
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.701
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.701
ACOM041529 Anopheles coluzzii ACOM041529 I 0.701
GH12956 Drosophila grimshawi FBgn0120434 I 0.700
AALB010330 Anopheles albimanus AALB010330 I 0.700