gabpa.S (Xenopus laevis)
Ets

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00178 (Ets) IPR000418 XB-GENE-17331756 T178063_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gabpa
M00157_2.00 		Mus musculus
NRCCGGAARY
RYTTCCGGYN		 PBM
Badis et al.(2009)
Gabpa_2829 		0.631 1.000
Gabpa
M01482_2.00 		Mus musculus
RSCGGAARY
RYTTCCGSY		 PBM
Wei et al.(2010)
Gabpa 		0.631 1.000
GABPA
M02996_2.00 		Homo sapiens
RCCGGAAGTD
HACTTCCGGY		 SELEX
Jolma et al.(2013)
GABPA_1 		0.631 1.000
GABPA
M04768_2.00 		Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN		 SELEX
Yin et al.(2017)
GABPA_eDBD_HT-SELEX 		0.631 1.000
GABPA
M05865_2.00 		Homo sapiens
RSCGGAWRYNN
NNRYWTCCGSY		 SMiLE-seq
Isakova et al.(2017)
GABPA 		0.631 1.000
Gabpa
M08113_2.00 		Mus musculus
CCGGAAGYVVN
NBBRCTTCCGG		 ChIP-seq
Mathelier et al.(2014)
MA0062.2 		0.631 1.000
GABPA
M07952_2.00 		Homo sapiens
VVCCGGAAGYV
BRCTTCCGGBB		 ChIP-seq
Gerstein et al.(2012)
GM12878_GABP_HudsonAlpha 		0.631 1.000
GABPA
M07953_2.00 		Homo sapiens
NVCCGGAAGYV
BRCTTCCGGBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_GABP_HudsonAlpha 		0.631 1.000
GABPA
M07954_2.00 		Homo sapiens
VVVCCGGAAGYNVN
NBNRCTTCCGGBBB		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_GABP_HudsonAlpha 		0.631 1.000
GABPA
M07955_2.00 		Homo sapiens
NBVVVSCGGAAGYVV
BBRCTTCCGSBBBVN		 ChIP-seq
Gerstein et al.(2012)
HepG2_GABP_HudsonAlpha 		0.631 1.000
GABPA
M07956_2.00 		Homo sapiens
VVVVCCGGAAGTN
NACTTCCGGBBBB		 ChIP-seq
Gerstein et al.(2012)
K562_GABP_HudsonAlpha 		0.631 1.000
GABPA
M09056_2.00 		Homo sapiens
VVNRSCGGAAGYVV
BBRCTTCCGSYNBB		 Misc
Kulakovskiy et al.(2013)
GABPA_HUMAN.H11MO.0.A 		0.631 1.000
Gabpa
M09069_2.00 		Mus musculus
NVVVSCGGAAGYRV
BYRCTTCCGSBBBN		 Misc
Kulakovskiy et al.(2013)
GABPA_MOUSE.H11MO.0.A 		0.631 1.000
GABPA
M09535_2.00 		Homo sapiens
NRCMGGAAGY
RCTTCCKGYN		 Misc
Heinz et al.(2010)
Jurkat-GABPa_GSE17954 		0.631 1.000
GABPA
M10504_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GABPA_07 		0.631 1.000
GABPA
M10505_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GABPA_08 		0.631 1.000
GABPA
M10506_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GABPA_Q4 		0.631 1.000
GABPA
M10507_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GABP_B 		0.631 1.000
GABPA
M10508_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GADP_01 		0.631 1.000
GABPA
M04769_2.00 		Homo sapiens
NRCCGGAARYN
NRYTTCCGGYN		 SELEX
Yin et al.(2017)
GABPA_eDBD_Methyl-HT-SELEX 		0.631 1.000
For this family, TFs with SR scores > 0.717 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAA62623 Ets 119 146

Links

Other Ets family TFs
Other Xenopus laevis TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOANG00000021194 Ornithorhynchus anatinus ENSOANG00000021194 N 0.991
nDi.2.2.2.g11508 Dirofilaria immitis nDi.2.2.2.g11508 N 0.987
ENSVPAG00000005650 Vicugna pacos ENSVPAG00000005650 I 0.985
ETS2 Procavia capensis ENSPCAG00000001036 I 0.985
ENSTBEG00000017397 Tupaia belangeri ENSTBEG00000017397 I 0.985
ETS1 Meleagris gallopavo ENSMGAG00000000967 I 0.981
ETS2 Felis catus ENSFCAG00000007489 I 0.980
ETS1 Dasypus novemcinctus ENSDNOG00000045506 I 0.980
HPBE_0001740201 Heligmosomoides bakeri HPBE_0001740201 I 0.979
OESDEN_14003 Oesophagostomum dentatum OESDEN_14003 I 0.979
HCOI00865000 Haemonchus contortus HCOI00865000 N 0.978
OESDEN_02390 Oesophagostomum dentatum OESDEN_02390 I 0.978
ELK3 Homo sapiens ENSG00000111145 D 0.976
ENSVPAG00000009100 Vicugna pacos ENSVPAG00000009100 I 0.975
Ehf Mus musculus ENSMUSG00000012350 D 0.975
Etv4 Dipodomys ordii ENSDORG00000013847 I 0.975
ENSTBEG00000014406 Tupaia belangeri ENSTBEG00000014406 I 0.975
SVUK_0001517201 Strongylus vulgaris SVUK_0001517201 N 0.974
ETV2 Sorex araneus ENSSARG00000010742 N 0.972
SPDEF Erinaceus europaeus ENSEEUG00000010400 N 0.971
SPDEF Danio rerio ENSDARG00000029930 N 0.971
ENSAPLG00000005437 Anas platyrhynchos ENSAPLG00000005437 I 0.971
DILT_0000398401 Diphyllobothrium latum DILT_0000398401 I 0.969
ENSMGAG00000003467 Meleagris gallopavo ENSMGAG00000003467 I 0.969
SNAPOd2T00022291001 Oikopleura dioica SNAPOd2T00022291001 N 0.968
SPER_0001231601 Spirometra erinaceieuropaei SPER_0001231601 N 0.968
SPER_0003941101 Spirometra erinaceieuropaei SPER_0003941101 I 0.967
ML46088a Mnemiopsis leidyi ML46088a N 0.964
Alligator_sinensis_CCG000956.1 Alligator sinensis Alligator_sinensis_CCG000956.1 I 0.963
GPLIN_000810800 Globodera pallida GPLIN_000810800 N 0.961
ENSP00000227163 Macaca fascicularis ENSP00000227163 I 0.959
HMEL005115 Heliconius melpomene HMEL005115 N 0.957
ETS2 Monodelphis domestica ENSMODG00000020979 I 0.950
SPDEF Dasypus novemcinctus ENSDNOG00000047693 N 0.944
PXEA_0000391701 Protopolystoma xenopodis PXEA_0000391701 N 0.938
HMEL013736 Heliconius melpomene HMEL013736 N 0.934
GABPA Microcebus murinus ENSMICG00000006341 I 0.931
ENSOANG00000022349 Ornithorhynchus anatinus ENSOANG00000022349 I 0.931
GABPA Ochotona princeps ENSOPRG00000009283 I 0.931
ENSSSCG00000024457 Sus scrofa ENSSSCG00000024457 I 0.928
scaffold700-EXSNAP2012.3 Pristionchus exspectatus scaffold700-EXSNAP2012.3 N 0.926
GABPA Pteropus vampyrus ENSPVAG00000011312 I 0.925
spi1b Danio rerio ENSDARG00000000767 I 0.922
HelroG189408 Helobdella robusta HelroG189408 N 0.920
ETV6 Echinops telfairi ENSETEG00000002501 I 0.915
ENSMEUG00000003760 Macropus eugenii ENSMEUG00000003760 I 0.915
ETV6 Procavia capensis ENSPCAG00000016039 I 0.915
ENSECAG00000021269 Equus caballus ENSECAG00000021269 I 0.911
Gfo_R003012 Geospiza fortis Gfo_R003012 N 0.907
Elf5 Mus musculus ENSMUSG00000027186 D 0.906
D917_09895 Trichinella nativa D917_09895 I 0.901
CPIJ001753 Culex quinquefasciatus CPIJ001753 N 0.889
CpipJ_CPIJ001753 Culex pipiens CpipJ_CPIJ001753 N 0.889
ETV5 Microcebus murinus ENSMICG00000010633 I 0.887
ETV2 Homo sapiens ENSG00000105672 D 0.875
ENSPVAG00000010230 Pteropus vampyrus ENSPVAG00000010230 I 0.874
ENSCING00000022310 Ciona intestinalis ENSCING00000022310 I 0.850
ELF3 Procavia capensis ENSPCAG00000012191 I 0.831
SPIC Echinops telfairi ENSETEG00000004217 N 0.828
ENSLOCG00000004449 Lepisosteus oculatus ENSLOCG00000004449 I 0.827
ENSSSCG00000003049 Sus scrofa ENSSSCG00000003049 I 0.827
ERF Procavia capensis ENSPCAG00000016986 I 0.827
PPAI006589 Phlebotomus papatasi PPAI006589 I 0.826
MESCA005353 Megaselia scalaris MESCA005353 I 0.826
AEPI009874 Anopheles epiroticus AEPI009874 I 0.826
Spic Mus musculus ENSMUSG00000004359 D 0.822
ENSTNIG00000007898 Tetraodon nigroviridis ENSTNIG00000007898 N 0.810
L898_g23769 Steinernema monticolum L898_g23769 N 0.793
Aan_R003365 Calypte anna Aan_R003365 I 0.792
Aan_R005450 Calypte anna Aan_R005450 I 0.792
ELF4 Pteropus vampyrus ENSPVAG00000004415 I 0.787
L893_g22986 Steinernema glaseri L893_g22986 N 0.781
ENSVPAG00000006558 Vicugna pacos ENSVPAG00000006558 I 0.759
ELF2 Sus scrofa ENSSSCG00000029920 I 0.759
SINV18588 Solenopsis invicta SINV18588 I 0.759
Elf4 Dipodomys ordii ENSDORG00000014956 I 0.759
ENSDORG00000015174 Dipodomys ordii ENSDORG00000015174 I 0.759
ENSTBEG00000008569 Tupaia belangeri ENSTBEG00000008569 I 0.759
SMU15031575 Schmidtea mediterranea SMU15031575 I 0.759
ELF1 Procavia capensis ENSPCAG00000013981 I 0.759
Afo_R010710 Aptenodytes forsteri Afo_R010710 I 0.752
ENSMGAG00000016365 Meleagris gallopavo ENSMGAG00000016365 I 0.752
PPA28920 Pristionchus pacificus PPA28920 N 0.732
ENSTRUG00000007244 Takifugu rubripes ENSTRUG00000007244 I 0.730
ENSGMOG00000006719 Gadus morhua ENSGMOG00000006719 N 0.730
ENSLOCG00000004635 Lepisosteus oculatus ENSLOCG00000004635 I 0.730
Aan_R007370 Calypte anna Aan_R007370 I 0.631
AAI00223 Xenopus laevis AAI00223 I 0.631
Pvit_15606 Pogona vitticeps Pvit_15606 I 0.631
Ogr08173 Ophisaurus gracilis Ogr08173 I 0.631
Tal_R007398 Tyto alba Tal_R007398 I 0.631
gabpa Xenopus tropicalis XB-GENE-987250 I 0.631
gabpa.L Xenopus laevis XB-GENE-987254 I 0.631
Myotis_brandtii_GABPA_10008980 Myotis brandtii Myotis_brandtii_GABPA_10008980 I 0.631
Gfo_R003322 Geospiza fortis Gfo_R003322 I 0.631
Alligator_sinensis_CCG001648.1 Alligator sinensis Alligator_sinensis_CCG001648.1 I 0.631
Cmyd_10021733 Chelonia mydas Cmyd_10021733 I 0.631
ENSP00000382948-D1 Bos grunniens ENSP00000382948-D1 I 0.631
ENSP00000382948 Macaca fascicularis ENSP00000382948 I 0.631
Afo_R004834 Aptenodytes forsteri Afo_R004834 I 0.631
ENSPSIG00000011806 Pelodiscus sinensis ENSPSIG00000011806 I 0.631
GABPA Erinaceus europaeus ENSEEUG00000009111 I 0.631
GABPA Equus caballus ENSECAG00000018900 I 0.631
Gabpa Dipodomys ordii ENSDORG00000014904 I 0.631
ENSFALG00000011983 Ficedula albicollis ENSFALG00000011983 I 0.631
GABPA Felis catus ENSFCAG00000027000 I 0.631
ENSLACG00000003060 Latimeria chalumnae ENSLACG00000003060 I 0.631
GABPA Gallus gallus ENSGALG00000015763 I 0.631
GABPA Homo sapiens ENSG00000154727 D 0.631
GABPA Dasypus novemcinctus ENSDNOG00000040145 I 0.631
ENSCSAG00000009015 Chlorocebus sabaeus ENSCSAG00000009015 I 0.631
ENSAPLG00000009339 Anas platyrhynchos ENSAPLG00000009339 I 0.631
ENSAMEG00000017175 Ailuropoda melanoleuca ENSAMEG00000017175 I 0.631
GABPA Anolis carolinensis ENSACAG00000014800 I 0.631
GABPA Bos taurus ENSBTAG00000019043 I 0.631
GABPA Canis familiaris ENSCAFG00000008512 I 0.631
ENSCPOG00000004704 Cavia porcellus ENSCPOG00000004704 I 0.631
GABPA Choloepus hoffmanni ENSCHOG00000010323 I 0.631
ENSLAFG00000011756 Loxodonta africana ENSLAFG00000011756 I 0.631
ENSMEUG00000006840 Macropus eugenii ENSMEUG00000006840 I 0.631
Gabpa Rattus norvegicus ENSRNOG00000053205 I 0.631
GABPA Pan troglodytes ENSPTRG00000013810 I 0.631
ENSPPYG00000011306 Pongo abelii ENSPPYG00000011306 I 0.631
GABPA Sorex araneus ENSSARG00000001665 I 0.631
ENSSHAG00000010701 Sarcophilus harrisii ENSSHAG00000010701 I 0.631
ENSTSYG00000005174 Tarsius syrichta ENSTSYG00000005174 I 0.631
GABPA Taeniopygia guttata ENSTGUG00000013556 I 0.631
ENSSTOG00000008645 Ictidomys tridecemlineatus ENSSTOG00000008645 I 0.631
GABPA Procavia capensis ENSPCAG00000005863 I 0.631
GABPA Otolemur garnettii ENSOGAG00000001648 I 0.631
GABPA Monodelphis domestica ENSMODG00000021010 I 0.631
GABPA Macaca mulatta ENSMMUG00000008727 I 0.631
GABPA Myotis lucifugus ENSMLUG00000011151 I 0.631
ENSMPUG00000001003 Mustela putorius furo ENSMPUG00000001003 I 0.631
Gabpa Mus musculus ENSMUSG00000008976 D 0.631
GABPA Oryctolagus cuniculus ENSOCUG00000006685 I 0.631
ENSNLEG00000002433 Nomascus leucogenys ENSNLEG00000002433 I 0.631
GABPA Vicugna pacos ENSVPAG00000006909 I 0.631