cassava1998.valid.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava1998.valid.m1 T181034_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava1998.valid.m1 FAR1 68 143
cassava1998.valid.m1 FAR1 233 309

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021065 Theobroma cacao TCM_021065 N 0.882
evm.TU.supercontig_16.55 Carica papaya evm.TU.supercontig_16.55 N 0.882
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.870
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.863
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.856
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N 0.843
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.830
PK22885.1 Cannabis sativa PK22885.1 N 0.830
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.824
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N 0.824
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.824
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.824
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.824
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.817
FRS12 Arabidopsis thaliana AT5G18960 N 0.817
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.810
Carubv10000255m.g Capsella rubella Carubv10000255m.g N 0.810
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N 0.810
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.810
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.810
FRS7 Arabidopsis thaliana AT3G06250 N 0.810
Pm008044 Prunus mume Pm008044 N 0.797
Bo3g013440 Brassica oleracea Bo3g013440 N 0.797
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.797
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.766
MDP0000295749 Malus domestica MDP0000295749 N 0.765
mgf010461m Mimulus guttatus mgf010461m N 0.765
MDP0000254218 Malus domestica MDP0000254218 N 0.758
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.752
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.745
Solyc10g084220.1 Solanum lycopersicum Solyc10g084220.1 N 0.739
mgf011099m Mimulus guttatus mgf011099m N 0.739
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.732