evm.TU.supercontig_16.55 (Carica papaya)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 evm.TU.supercontig_16.55 T181376_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_16.55 FAR1 44 120
evm.model.supercontig_16.55 FAR1 196 272

Links

Other FAR1 family TFs
Other Carica papaya TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava1998.valid.m1 Manihot esculenta cassava1998.valid.m1 N 0.882
TCM_021065 Theobroma cacao TCM_021065 N 0.877
Gorai.006G255400 Gossypium raimondii Gorai.006G255400 N 0.876
Thhalv10020128m.g Eutrema salsugineum Thhalv10020128m.g N 0.870
POPTR_0010s03000 Populus trichocarpa POPTR_0010s03000 N 0.864
Bostr.2570s0035 Boechera stricta Bostr.2570s0035 N 0.857
FRS12 Arabidopsis thaliana AT5G18960 N 0.857
FRS7 Arabidopsis thaliana AT3G06250 N 0.856
Cagra.0263s0023 Capsella grandiflora Cagra.0263s0023 N 0.856
Carubv10000255m.g Capsella rubella Carubv10000255m.g N 0.856
Bostr.26527s0315 Boechera stricta Bostr.26527s0315 N 0.856
Bo3g013440 Brassica oleracea Bo3g013440 N 0.850
Thhalv10012731m.g Eutrema salsugineum Thhalv10012731m.g N 0.850
PK22885.1 Cannabis sativa PK22885.1 N 0.844
Carubv10013017m.g Capsella rubella Carubv10013017m.g N 0.844
Cagra.3793s0006 Capsella grandiflora Cagra.3793s0006 N 0.844
Ciclev10004376m.g Citrus clementina Ciclev10004376m.g N 0.838
orange1.1g004138m.g Citrus sinensis orange1.1g004138m.g N 0.831
POPTR_0008s20380 Populus trichocarpa POPTR_0008s20380 N 0.825
SapurV1A.0152s0560 Salix purpurea SapurV1A.0152s0560 N 0.825
SapurV1A.1026s0020 Salix purpurea SapurV1A.1026s0020 N 0.825
SapurV1A.0407s0270 Salix purpurea SapurV1A.0407s0270 N 0.818
PRUPE_ppa001884mg Prunus persica PRUPE_ppa001884mg N 0.812
Pm008044 Prunus mume Pm008044 N 0.812
MDP0000254218 Malus domestica MDP0000254218 N 0.792
MDP0000295749 Malus domestica MDP0000295749 N 0.792
gene06133-v1.0-hybrid Fragaria vesca gene06133-v1.0-hybrid N 0.766
Cucsa.253860 Cucumis sativus Cucsa.253860 N 0.760
mgf010461m Mimulus guttatus mgf010461m N 0.734
GLYMA13G28230 Glycine max GLYMA13G28230 N 0.734
Solyc10g084220.1 Solanum lycopersicum Solyc10g084220.1 N 0.734
mgf011099m Mimulus guttatus mgf011099m N 0.727
GLYMA15G10830 Glycine max GLYMA15G10830 N 0.721
VIT_05s0020g02450 Vitis vinifera VIT_05s0020g02450 N 0.701