Gorai.006G118900 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.006G118900 T181500_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G118900.1 FAR1 63 157
Gorai.006G118900.2 FAR1 63 157
Gorai.006G118900.3 FAR1 63 157
Gorai.006G118900.4 FAR1 63 157

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_041141 Theobroma cacao TCM_041141 N 0.956
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.922
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.922
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.922
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.911
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.900
29685.m000503 Ricinus communis 29685.m000503 N 0.900
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.900
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.900
PK06148.1 Cannabis sativa PK06148.1 N 0.900
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.900
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.889
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.889
FRS11 Arabidopsis thaliana AT1G10240 N 0.889
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.889
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.889
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.878
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.878
Bo5g010680 Brassica oleracea Bo5g010680 N 0.878
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.878
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.878
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.878
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.867
Pm003854 Prunus mume Pm003854 N 0.867
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.867
MDP0000234814 Malus domestica MDP0000234814 N 0.843
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.811
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.800
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.800
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.789
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.789
OB04G20960 Oryza brachyantha OB04G20960 N 0.778
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.744
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.733
OS04G0443000 Oryza sativa OS04G0443000 N 0.733
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.733
Si012297m.g Setaria italica Si012297m.g N 0.733
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.700