Pavir.Bb03328 (Panicum virgatum)
FAR1,GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1)
PF00320 (GATA) 		IPR004330
IPR000679 		Pavir.Bb03328 T182297_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03328.1.p GATA 44 81
Pavir.Bb03328.1.p FAR1 114 201
Pavir.Bb03328.2.p GATA 44 81
Pavir.Bb03328.2.p FAR1 114 201
Pavir.Bb03328.3.p GATA 44 81
Pavir.Bb03328.3.p FAR1 114 201
Pavir.Bb03328.4.p GATA 44 81
Pavir.Bb03328.4.p FAR1 114 201

Links

Other FAR1,GATA family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ba00417 Panicum virgatum Pavir.Ba00417 N 1.000
Traes_2AS_3DDBFDD8D Triticum aestivum Traes_2AS_3DDBFDD8D N 0.992
TRIUR3_17271 Triticum urartu TRIUR3_17271 N 0.992
MLOC_70827 Hordeum vulgare MLOC_70827 N 0.992
Traes_2DS_C83B7F5CF Triticum aestivum Traes_2DS_C83B7F5CF N 0.992
Traes_2BS_59D534318 Triticum aestivum Traes_2BS_59D534318 N 0.992
BRADI1G20830 Brachypodium distachyon BRADI1G20830 N 0.984
OB07G27730 Oryza brachyantha OB07G27730 N 0.984
GRMZM2G114461 Zea mays GRMZM2G114461 N 0.984
BGIOSGA026135 Oryza indica BGIOSGA026135 N 0.976
ORGLA07G0170400 Oryza glaberrima ORGLA07G0170400 N 0.968
OS07G0615900 Oryza sativa OS07G0615900 N 0.968
GSMUA_Achr2G15020_001 Musa acuminata GSMUA_Achr2G15020_001 N 0.742
Traes_4AS_124CCE880 Triticum aestivum Traes_4AS_124CCE880 N 0.734
Traes_4DL_C77385A0D Triticum aestivum Traes_4DL_C77385A0D N 0.726
OS03G0181600 Oryza sativa OS03G0181600 N 0.718
ORGLA03G0057700 Oryza glaberrima ORGLA03G0057700 N 0.718
BGIOSGA011986 Oryza indica BGIOSGA011986 N 0.718