CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000001296
(
Latimeria chalumnae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSLACG00000001296
T185984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXQ1
M04823_2.00
Homo sapiens
YWRHRTAAACWD
HWGTTTAYDYWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_HT-SELEX
0.740
0.930
FOXQ1
M09093_2.00
Homo sapiens
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_HUMAN.H11MO.0.C
0.740
0.930
Foxq1
M09105_2.00
Mus musculus
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_MOUSE.H11MO.0.C
0.740
0.930
FOXQ1_RAT
M10572_2.00
Rattus norvegicus
AWATAAACAWTN
NAWTGTTTAKWT
Transfac
Matys et al.(2006)
V$HFH1_01
0.740
0.930
FOXQ1
M04824_2.00
Homo sapiens
YWAYRTAAACWD
HWGTTTAYRTWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_Methyl-HT-SELEX
0.740
0.930
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.687
0.605
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.687
0.605
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000001450
Forkhead
66
156
KPPYSYIALIAMAIRDSPTGRLTLAEINDYLMKKFMFFRGTYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVF
Links
Other
Forkhead
family TFs
Other
Latimeria chalumnae
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000020363
Poecilia formosa
ENSPFOG00000020363
I
0.828
Sakowv30035367m.g
Saccoglossus kowalevskii
Sakowv30035367m.g
I
0.812
ENSONIG00000021432
Oreochromis niloticus
ENSONIG00000021432
I
0.807
ENSPMAG00000004942
Petromyzon marinus
ENSPMAG00000004942
I
0.798
foxq1b
Danio rerio
ENSDARG00000055395
I
0.790
estExt_gwp.C_60230
Branchiostoma floridae
estExt_gwp.C_60230
I
0.781
CapteG175391
Capitella teleta
CapteG175391
I
0.776
foxq1
Xenopus tropicalis
XB-GENE-483842
I
0.765
ENSONIG00000006405
Oreochromis niloticus
ENSONIG00000006405
I
0.763
foxq1b
Takifugu rubripes
ENSTRUG00000001789
I
0.763
ENSLOCG00000012990
Lepisosteus oculatus
ENSLOCG00000012990
I
0.763
foxq1b
Gasterosteus aculeatus
ENSGACG00000005009
I
0.763
ENSPFOG00000020964
Poecilia formosa
ENSPFOG00000020964
I
0.763
ENSAMXG00000006160
Astyanax mexicanus
ENSAMXG00000006160
I
0.763
ENSAMXG00000013180
Astyanax mexicanus
ENSAMXG00000013180
I
0.763
ENSXMAG00000019810
Xiphophorus maculatus
ENSXMAG00000019810
I
0.763
ENSGMOG00000017063
Gadus morhua
ENSGMOG00000017063
I
0.759
foxq1a
Danio rerio
ENSDARG00000030896
I
0.759
ENSGMOG00000020500
Gadus morhua
ENSGMOG00000020500
I
0.750
FOXQ1
Homo sapiens
ENSG00000164379
D
0.740
ENSSHAG00000012341
Sarcophilus harrisii
ENSSHAG00000012341
I
0.740
FOXQ1
Pteropus vampyrus
ENSPVAG00000015362
I
0.740
Foxq1
Mus musculus
ENSMUSG00000038415
D
0.740
FOXQ1_RAT
Rattus norvegicus
FOXQ1_RAT
D
0.740
ENSCSAG00000019113
Chlorocebus sabaeus
ENSCSAG00000019113
I
0.740
ENSMPUG00000018966
Mustela putorius furo
ENSMPUG00000018966
I
0.740
FOXQ1
Pan troglodytes
ENSPTRG00000029883
I
0.740
FOXQ1
Monodelphis domestica
ENSMODG00000008316
I
0.740
FOXQ1
Erinaceus europaeus
ENSEEUG00000009057
I
0.740
ENSMEUG00000009518
Macropus eugenii
ENSMEUG00000009518
I
0.740
FOXQ1
Loxodonta africana
ENSLAFG00000000082
I
0.733
ENSCSAVG00000006732
Ciona savignyi
ENSCSAVG00000006732
I
0.731
foxq
Ciona intestinalis
ENSCING00000019322
I
0.730
TriadG30486
Trichoplax adhaerens
TriadG30486
I
0.728
Myotis_brandtii_Foxq1_10020361
Myotis brandtii
Myotis_brandtii_Foxq1_10020361
I
0.728
ENSETEG00000003274
Echinops telfairi
ENSETEG00000003274
I
0.719
SPU_019345
Strongylocentrotus purpuratus
SPU_019345
I
0.709
LotgiG117350
Lottia gigantea
LotgiG117350
I
0.707
csin100553
Clonorchis sinensis
csin100553
I
0.694
SNAPOd2T00026236001
Oikopleura dioica
SNAPOd2T00026236001
I
0.694
T265_04564
Opisthorchis viverrini
T265_04564
I
0.694
ENSMODG00000025014
Monodelphis domestica
ENSMODG00000025014
I
0.691
CapteG50240
Capitella teleta
CapteG50240
I
0.691
SPER_0003672701
Spirometra erinaceieuropaei
SPER_0003672701
I
0.690
foxf2.L
Xenopus laevis
XB-GENE-6492365
I
0.687
foxf1.L
Xenopus laevis
XB-GENE-865226
I
0.687
ENSTNIG00000008224
Tetraodon nigroviridis
ENSTNIG00000008224
I
0.687
ENSSHAG00000012906
Sarcophilus harrisii
ENSSHAG00000012906
I
0.687
FOXF1
Pteropus vampyrus
ENSPVAG00000007544
I
0.687
ENSPPYG00000007623
Pongo abelii
ENSPPYG00000007623
I
0.687
FOXF1
Pan troglodytes
ENSPTRG00000008439
I
0.687
foxf1
Tetraodon nigroviridis
ENSTNIG00000009284
I
0.687
BGLB014115
Biomphalaria glabrata
BGLB014115
I
0.687
foxf2
Xenopus tropicalis
XB-GENE-484646
I
0.687
ENSXMAG00000006203
Xiphophorus maculatus
ENSXMAG00000006203
I
0.687
CAB44731
Xenopus laevis
CAB44731
I
0.687
ENSP00000262426
Macaca fascicularis
ENSP00000262426
I
0.687
TC002814
Tribolium castaneum
TC002814
I
0.687
LDEC015330
Leptinotarsa decemlineata
LDEC015330
I
0.687
ENSXMAG00000003079
Xiphophorus maculatus
ENSXMAG00000003079
I
0.687
ENSTRUG00000007367
Takifugu rubripes
ENSTRUG00000007367
I
0.687
FOXF1
Tursiops truncatus
ENSTTRG00000005881
I
0.687
YQE_08285
Dendroctonus ponderosae
YQE_08285
I
0.687
foxf1
Xenopus tropicalis
XB-GENE-478922
I
0.687
foxf1.S
Xenopus laevis
XB-GENE-6254084
I
0.687
foxf2
Oryzias latipes
ENSORLG00000012595
I
0.687
FOXF1
Homo sapiens
ENSG00000103241
D
0.687
FOXF1
Felis catus
ENSFCAG00000030557
I
0.687
FOXF1
Erinaceus europaeus
ENSEEUG00000002843
I
0.687
ENSGACG00000005011
Gasterosteus aculeatus
ENSGACG00000005011
I
0.687
foxf1
Gasterosteus aculeatus
ENSGACG00000015956
I
0.687
ENSGMOG00000003941
Gadus morhua
ENSGMOG00000003941
I
0.687
FOXF2
Gorilla gorilla
ENSGGOG00000013479
I
0.687
foxf2a
Gasterosteus aculeatus
ENSGACG00000016466
I
0.687
FOXF1
Equus caballus
ENSECAG00000020094
I
0.687
foxf2b
Danio rerio
ENSDARG00000070389
I
0.687
FOXF1
Bos taurus
ENSBTAG00000000009
I
0.687
ENSAMXG00000014746
Astyanax mexicanus
ENSAMXG00000014746
I
0.687
ENSAMXG00000003465
Astyanax mexicanus
ENSAMXG00000003465
I
0.687
FOXF1
Canis familiaris
ENSCAFG00000019918
I
0.687
FOXF1
Callithrix jacchus
ENSCJAG00000017152
I
0.687
foxf2a
Danio rerio
ENSDARG00000017195
I
0.687
foxf1
Danio rerio
ENSDARG00000015399
I
0.687
ENSCSAG00000003141
Chlorocebus sabaeus
ENSCSAG00000003141
I
0.687
ENSGMOG00000017082
Gadus morhua
ENSGMOG00000017082
I
0.687
ENSLACG00000001797
Latimeria chalumnae
ENSLACG00000001797
I
0.687
ENSONIG00000009636
Oreochromis niloticus
ENSONIG00000009636
I
0.687
ENSONIG00000006406
Oreochromis niloticus
ENSONIG00000006406
I
0.687
ENSONIG00000005638
Oreochromis niloticus
ENSONIG00000005638
I
0.687
FOXF1
Otolemur garnettii
ENSOGAG00000011910
I
0.687
foxf1
Oryzias latipes
ENSORLG00000009476
I
0.687
ENSAMEG00000018266
Ailuropoda melanoleuca
ENSAMEG00000018266
I
0.687
ENSPFOG00000017654
Poecilia formosa
ENSPFOG00000017654
I
0.687
ENSPFOG00000000493
Poecilia formosa
ENSPFOG00000000493
I
0.687
ENSPANG00000006104
Papio anubis
ENSPANG00000006104
I
0.687
ENSMMUG00000019503
Macaca mulatta
ENSMMUG00000019503
I
0.687
FOXF1
Ornithorhynchus anatinus
ENSOANG00000007633
I
0.687
FOXF1
Loxodonta africana
ENSLAFG00000002036
I
0.687
ENSLOCG00000012987
Lepisosteus oculatus
ENSLOCG00000012987
I
0.687
ENSLACG00000014221
Latimeria chalumnae
ENSLACG00000014221
I
0.687
ENSLOCG00000001042
Lepisosteus oculatus
ENSLOCG00000001042
I
0.687
ENSGMOG00000013623
Gadus morhua
ENSGMOG00000013623
I
0.686
SMAR006586
Strigamia maritima
SMAR006586
I
0.684
FOXF1
Oryctolagus cuniculus
ENSOCUG00000001701
I
0.684
NEMVEDRAFT_v1g201028
Nematostella vectensis
NEMVEDRAFT_v1g201028
N
0.683
Sakowv30034885m.g
Saccoglossus kowalevskii
Sakowv30034885m.g
I
0.681
ENSPMAG00000004457
Petromyzon marinus
ENSPMAG00000004457
I
0.681
PHUM473500
Pediculus humanus
PHUM473500
I
0.674
ACHR002653
Anopheles christyi
ACHR002653
I
0.673
Ocbimv22026844m.g
Octopus bimaculoides
Ocbimv22026844m.g
I
0.667
ENSTRUG00000004486
Takifugu rubripes
ENSTRUG00000004486
I
0.667
D917_06251
Trichinella nativa
D917_06251
I
0.666
GH15773
Drosophila grimshawi
FBgn0123244
I
0.666
EFV52873
Trichinella spiralis
EFV52873
I
0.666
RPRC011791
Rhodnius prolixus
RPRC011791
I
0.666
PPAI008193
Phlebotomus papatasi
PPAI008193
I
0.664