CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400027264
(
Solanum tuberosum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PGSC0003DMG400027264
T194722_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400070133
GATA
61
96
CLHCEITKTPQWRAGPMGPKTLCNACGVRYKKGRLY
PGSC0003DMT400070134
GATA
236
271
CLHCEITKTPQWRAGPMGPKTLCNACGVRYKKGRLY
Links
Other
GATA
family TFs
Other
Solanum tuberosum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc04g015360.2
Solanum lycopersicum
Solyc04g015360.2
N
0.867
OSTLU_32750
Ostreococcus lucimarinus
OSTLU_32750
N
0.831
e_gw1.7.793.1
Ostreococcus RCC809
e_gw1.7.793.1
N
0.817
estExt_fgenesh1_pg.C_Chr_07.00010219
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_07.00010219
N
0.817
MDP0000401351
Malus domestica
MDP0000401351
N
0.805
Cla017447
Citrullus lanatus
Cla017447
N
0.805
CHLREDRAFT_205871
Chlamydomonas reinhardtii
CHLREDRAFT_205871
N
0.805
Cucsa.340570
Cucumis sativus
Cucsa.340570
N
0.805