CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000401351
(
Malus domestica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
MDP0000401351
T196687_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000401351
GATA
7
41
QHCGTETTPQWRPGPHGNKTLCDACEVRYRKSGKL
Links
Other
GATA
family TFs
Other
Malus domestica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla017447
Citrullus lanatus
Cla017447
N
0.832
Cucsa.340570
Cucumis sativus
Cucsa.340570
N
0.832
OSTLU_32750
Ostreococcus lucimarinus
OSTLU_32750
N
0.809
Solyc04g015360.2
Solanum lycopersicum
Solyc04g015360.2
N
0.805
PGSC0003DMG400027264
Solanum tuberosum
PGSC0003DMG400027264
N
0.805