CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.340570
(
Cucumis sativus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Cucsa.340570
T196063_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.340570.1
GATA
208
243
CSHCQAQRTPQWRSGPLGPKTLCNACGVRYKKSGRL
Links
Other
GATA
family TFs
Other
Cucumis sativus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla017447
Citrullus lanatus
Cla017447
N
0.867
MDP0000401351
Malus domestica
MDP0000401351
N
0.832
Solyc04g015360.2
Solanum lycopersicum
Solyc04g015360.2
N
0.805
PGSC0003DMG400027264
Solanum tuberosum
PGSC0003DMG400027264
N
0.805
OSTLU_32750
Ostreococcus lucimarinus
OSTLU_32750
N
0.805