CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g089100
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_2g089100
T200519_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES67303
GRAS
49
443
IEKLLLHCASALESNDITLAQQVMWVLNNVASPLGDTNQRLTSWFLRALISRASRICPTSMNFKGSNYTIQRRLMSVTELAGYVDLIPWHRFGFCASNNEIFKSIKGFKRVHILDFSITPCMQWPTFIDSLAKLPEGPPSLRITVPSFRPMVPPLVNISIHEVGQRLGNFAKFKDVPFEFNVIGDNVSLTSEDLSNIESTNFHFESMLSLLNPSMLNLREDEALVINCQNWLRYLSDDRKGQNISLRDAFMNLVKGLNPQIVLLVDEDCDLSASSLTSRITASFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGHQRIERLESGMQMSQRMKNAGYFSVPFCEETVLEVKGLLDEHASGWGMKREESMLVLTWKGNSCVFATAWV
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_14137
Cicer arietinum
Ca_14137
N
0.908
Ca_27895
Cicer arietinum
Ca_27895
N
0.908
GLYMA13G38080
Glycine max
GLYMA13G38080
N
0.875
GLYMA12G32350
Glycine max
GLYMA12G32350
N
0.864
LjSGA_045015.1
Lotus japonicus
LjSGA_045015.1
N
0.824
LjSGA_073109.1
Lotus japonicus
LjSGA_073109.1
N
0.811
cassava21819.m1
Manihot esculenta
cassava21819.m1
N
0.758
orange1.1g041891m.g
Citrus sinensis
orange1.1g041891m.g
N
0.753
TCM_007806
Theobroma cacao
TCM_007806
N
0.753
Ciclev10015222m.g
Citrus clementina
Ciclev10015222m.g
N
0.748
VIT_12s0059g02770
Vitis vinifera
VIT_12s0059g02770
N
0.740
30156.m001710
Ricinus communis
30156.m001710
N
0.739
Gorai.013G072100
Gossypium raimondii
Gorai.013G072100
N
0.734
SapurV1A.0312s0260
Salix purpurea
SapurV1A.0312s0260
N
0.724
PRUPE_ppa016112mg
Prunus persica
PRUPE_ppa016112mg
N
0.719
evm.TU.supercontig_8.255
Carica papaya
evm.TU.supercontig_8.255
N
0.715
Pm015255
Prunus mume
Pm015255
N
0.712
POPTR_0017s06900
Populus trichocarpa
POPTR_0017s06900
N
0.711
MDP0000863616
Malus domestica
MDP0000863616
N
0.704