POPTR_0001s33360 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0001s33360 T201170_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s33360.1 GRAS 314 678

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.920
VIT_14s0068g01610 Vitis vinifera VIT_14s0068g01610 N 0.912
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N 0.904
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N 0.904
30131.m007029 Ricinus communis 30131.m007029 N 0.898
Solyc02g094340.1 Solanum lycopersicum Solyc02g094340.1 N 0.893
PGSC0003DMG400020243 Solanum tuberosum PGSC0003DMG400020243 N 0.893
gene01356-v1.0-hybrid Fragaria vesca gene01356-v1.0-hybrid N 0.879
Lus10012554.g Linum usitatissimum Lus10012554.g N 0.879
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.879
Pm016121 Prunus mume Pm016121 N 0.873
PRUPE_ppa024399mg Prunus persica PRUPE_ppa024399mg N 0.871
TCM_017269 Theobroma cacao TCM_017269 N 0.862
evm.TU.supercontig_70.116 Carica papaya evm.TU.supercontig_70.116 N 0.862
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.860
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.857
Cla012038 Citrullus lanatus Cla012038 N 0.854
mgf025393m Mimulus guttatus mgf025393m N 0.848
Gorai.006G044300 Gossypium raimondii Gorai.006G044300 N 0.848
GLYMA16G05751 Glycine max GLYMA16G05751 N 0.837
GLYMA19G26735 Glycine max GLYMA19G26735 N 0.826
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N 0.804
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N 0.777
Pavir.J25769 Panicum virgatum Pavir.J25769 N 0.768
SapurV1A.0123s0140 Salix purpurea SapurV1A.0123s0140 N 0.755
Eucgr.I01625 Eucalyptus grandis Eucgr.I01625 N 0.747
OPUNC11G12230 Oryza punctata OPUNC11G12230 N 0.722
Sb05g018070 Sorghum bicolor Sb05g018070 N 0.722
Si027708m.g Setaria italica Si027708m.g N 0.719
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.714
OGLUM11G14080 Oryza glumaepatula OGLUM11G14080 N 0.708
ORGLA11G0124900 Oryza glaberrima ORGLA11G0124900 N 0.708
BRADI4G18390 Brachypodium distachyon BRADI4G18390 N 0.708
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.702