CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_06s0004g04960
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_06s0004g04960
T201822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g04960.t01
GRAS
391
731
FGTLLIQCAQAVSADDHRTANELLKQIRQHSSPFGDGYQRLAHCFADGLEARLAGTGTEIYTVLASKKVSAAAMLKAYELFLAACPFKKISAFFANHMILRLAEKATVIHVIDFGILYGFQWPIFIQRLSARPGGPPKLRITGIELPQPGFRPAERVEETGRRLAKYCERFNVPFEYNAIAQKWETIRIEDLKIDRNEAIAVNCLFRSKNLLDETIVVDSPRNAVLGLIRKINPQIFVHSIINGSYNAPFFVTRFREALFHFSAVFDVLDNNAPRENEQRLMFEKEFCGREVMNVIACEGSQRVERPETYKQWHVRTLKAGFRQLKLDQQLAKKLKTKMGI
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_06s0004g04950
Vitis vinifera
VIT_06s0004g04950
N
0.781
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.743
Pm000719
Prunus mume
Pm000719
N
0.740
TCM_041814
Theobroma cacao
TCM_041814
N
0.728
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.728
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.718
TCM_041815
Theobroma cacao
TCM_041815
N
0.711
cassava19449.valid.m1
Manihot esculenta
cassava19449.valid.m1
N
0.711
Ca_16678
Cicer arietinum
Ca_16678
N
0.705
SapurV1A.0040s0520
Salix purpurea
SapurV1A.0040s0520
N
0.703