cassava19449.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava19449.valid.m1 T202059_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19449.valid.m1 GRAS 405 736

Links

Other GRAS family TFs
Other Manihot esculenta TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28650.m000190 Ricinus communis 28650.m000190 N 0.851
POPTR_0009s03800 Populus trichocarpa POPTR_0009s03800 N 0.815
SapurV1A.0041s0170 Salix purpurea SapurV1A.0041s0170 N 0.793
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.775
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.772
TCM_041814 Theobroma cacao TCM_041814 N 0.769
PRUPE_ppa002797mg Prunus persica PRUPE_ppa002797mg N 0.751
Pm027957 Prunus mume Pm027957 N 0.748
Pm000718 Prunus mume Pm000718 N 0.748
Gorai.001G111600 Gossypium raimondii Gorai.001G111600 N 0.745
Gorai.003G130500 Gossypium raimondii Gorai.003G130500 N 0.729
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.723
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.720
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.720
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.720
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.714
VIT_06s0004g04960 Vitis vinifera VIT_06s0004g04960 N 0.711
POPTR_0001s24860 Populus trichocarpa POPTR_0001s24860 N 0.701