Pavir.J19041 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J19041 T203060_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J19041.1.p GRAS 6 147

Links

Other GRAS family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.992
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.969
OPUNC11G01240 Oryza punctata OPUNC11G01240 N 0.944
ONIVA11G01600 Oryza nivara ONIVA11G01600 N 0.944
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.944
MLOC_79758 Hordeum vulgare MLOC_79758 N 0.930
BRADI4G44090 Brachypodium distachyon BRADI4G44090 N 0.930
Pavir.J21588 Panicum virgatum Pavir.J21588 N 0.903
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.901
OB11G11140 Oryza brachyantha OB11G11140 N 0.887
OB12G11340 Oryza brachyantha OB12G11340 N 0.887
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.880
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.880
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.838
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.831
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.831
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.824
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.824
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.817
Cla012346 Citrullus lanatus Cla012346 N 0.817
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.817
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.817
Ca_09530 Cicer arietinum Ca_09530 N 0.810
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.803
Bo8g083500 Brassica oleracea Bo8g083500 N 0.803
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.803
SCR Arabidopsis thaliana AT3G54220 N 0.803
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.803
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.803
mgf012242m Mimulus guttatus mgf012242m N 0.796
OB07G24850 Oryza brachyantha OB07G24850 N 0.750
OS07G0567700 Oryza sativa OS07G0567700 N 0.750
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.746