CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtf2ird1
(
Takifugu rubripes
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSTRUG00000010068
T203512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2IRD1
M10618_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_01
0.743
0.743
GTF2IRD1
M10619_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BEN_02
0.743
0.743
GTF2IRD1
M10620_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GTF2IRD1_01
0.796
0.796
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000025329
GTF2I-like
133
202
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025329
GTF2I-like
352
426
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025329
GTF2I-like
576
650
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025329
GTF2I-like
710
784
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025329
GTF2I-like
807
881
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025330
GTF2I-like
107
176
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025330
GTF2I-like
326
400
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025330
GTF2I-like
550
624
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025330
GTF2I-like
684
758
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025330
GTF2I-like
781
855
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025331
GTF2I-like
103
172
LKRLCPCAGEALGKNSLLPVPYDSILKEPGCVVAHGLPDGVGLKKPCEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025331
GTF2I-like
322
396
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025331
GTF2I-like
541
615
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025331
GTF2I-like
675
749
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025331
GTF2I-like
772
846
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025332
GTF2I-like
1
24
CEYDTKTLMKILEQSHRIQFSVNR
ENSTRUP00000025332
GTF2I-like
174
248
LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025332
GTF2I-like
393
467
LRRQVENLFSIKFAEALGLPEPAKVPYSKFQIYPEDLVVTGLPDGISLRRPNCYGTAKLRKILAASSQIQFVIKR
ENSTRUP00000025332
GTF2I-like
527
601
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025332
GTF2I-like
655
729
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025333
GTF2I-like
1
44
CDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025333
GTF2I-like
90
164
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025333
GTF2I-like
194
268
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
ENSTRUP00000025334
GTF2I-like
1
44
CDPGAVEIIGIPDQIPFKRPCTYGVPKLKRILDERHGIRFIVKR
ENSTRUP00000025334
GTF2I-like
69
143
LREQVQDLFNRKYGEALGIKYPVQVPYKRIKNNPDSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIRFTITR
ENSTRUP00000025334
GTF2I-like
173
247
LREQVKELFNRKYGEALGSDHSVLVPYKLIRGSPESVEVSGLPEDIPFRNPNTYDIVCLEKILQAADKIVISVKN
Links
Other
GTF2I-like
family TFs
Other
Takifugu rubripes
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gtf2ird1
Tetraodon nigroviridis
ENSTNIG00000004695
I
0.954
ENSXMAG00000015294
Xiphophorus maculatus
ENSXMAG00000015294
I
0.907
gtf2ird1
Gasterosteus aculeatus
ENSGACG00000020844
I
0.889
ENSPFOG00000001233
Poecilia formosa
ENSPFOG00000001233
I
0.876
gtf2ird1
Oryzias latipes
ENSORLG00000015316
I
0.862
ENSAMXG00000007482
Astyanax mexicanus
ENSAMXG00000007482
I
0.855
ENSGMOG00000013638
Gadus morhua
ENSGMOG00000013638
I
0.855
ENSLOCG00000002184
Lepisosteus oculatus
ENSLOCG00000002184
I
0.846
gtf2ird1
Danio rerio
ENSDARG00000022203
I
0.840
Gfo_R013537
Geospiza fortis
Gfo_R013537
I
0.799
Gtf2ird1
Rattus norvegicus
ENSRNOG00000001478
I
0.799
LOC100912262
Rattus norvegicus
ENSRNOG00000050193
I
0.799
ENSAMEG00000015311
Ailuropoda melanoleuca
ENSAMEG00000015311
I
0.796
GTF2IRD1
Canis familiaris
ENSCAFG00000011763
I
0.796
ENSPPYG00000017485
Pongo abelii
ENSPPYG00000017485
I
0.796
GTF2IRD1
Pan troglodytes
ENSPTRG00000019292
I
0.796
GTF2IRD1
Sus scrofa
ENSSSCG00000007720
I
0.796
GTF2IRD1
Taeniopygia guttata
ENSTGUG00000003638
I
0.796
ENSOARG00000011517
Ovis aries
ENSOARG00000011517
I
0.796
GTF2IRD1
Homo sapiens
ENSG00000006704
D
0.796
GTF2IRD1
Bos taurus
ENSBTAG00000006212
I
0.796
GTF2IRD1
Felis catus
ENSFCAG00000006551
I
0.796
GTF2IRD1
Macaca mulatta
ENSMMUG00000018842
I
0.796
GTF2IRD1
Cavia porcellus
ENSCPOG00000004421
I
0.796
Gtf2ird1
Mus musculus
ENSMUSG00000023079
I
0.796
ENSSTOG00000014343
Ictidomys tridecemlineatus
ENSSTOG00000014343
I
0.793
Brh_R010572
Buceros rhinoceros
Brh_R010572
I
0.793
Aan_R007261
Calypte anna
Aan_R007261
I
0.793
Cmyd_10014806
Chelonia mydas
Cmyd_10014806
I
0.759
GTF2IRD1
Otolemur garnettii
ENSOGAG00000013029
I
0.756
ENSMEUG00000012139
Macropus eugenii
ENSMEUG00000012139
I
0.751
ENSAPLG00000006811
Anas platyrhynchos
ENSAPLG00000006811
I
0.751
ENSPSIG00000012562
Pelodiscus sinensis
ENSPSIG00000012562
I
0.749
ENSLACG00000018407
Latimeria chalumnae
ENSLACG00000018407
I
0.749
Alligator_sinensis_CCG003099.1
Alligator sinensis
Alligator_sinensis_CCG003099.1
I
0.746
GTF2IRD1
Dasypus novemcinctus
ENSDNOG00000024296
I
0.746
GTF2IRD1
Myotis lucifugus
ENSMLUG00000001668
I
0.746
Myotis_brandtii_GTF2IRD1_10014286
Myotis brandtii
Myotis_brandtii_GTF2IRD1_10014286
I
0.746
gtf2ird1.S
Xenopus laevis
XB-GENE-5857419
I
0.741
B7ZQJ9
Xenopus laevis
B7ZQJ9
I
0.741
GTF2IRD1
Equus caballus
ENSECAG00000019745
I
0.741
GTF2IRD1
Tupaia belangeri
ENSTBEG00000014017
I
0.741
Afo_R005311
Aptenodytes forsteri
Afo_R005311
I
0.733
GTF2IRD1
Oryctolagus cuniculus
ENSOCUG00000026916
I
0.728
Pvit_17519
Pogona vitticeps
Pvit_17519
I
0.722