AMSG_02417 (Thecamonas trahens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AMSG_02417 T203625_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.725 0.436
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.725 0.436
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.725 0.436
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.725 0.436
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.659 0.410
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMSG_02417T0 Homeodomain 211 256

Links

Other Homeodomain family TFs
Other Thecamonas trahens TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nRc.2.0.1.g39805 Romanomermis culicivorax nRc.2.0.1.g39805 I 0.733
ENSLOCG00000014306 Lepisosteus oculatus ENSLOCG00000014306 I 0.733
Meis3 Dipodomys ordii ENSDORG00000008441 I 0.725
ENSEEUG00000006123 Erinaceus europaeus ENSEEUG00000006123 I 0.725
MEIS3 Canis familiaris ENSCAFG00000004161 I 0.725
ENSAMEG00000008199 Ailuropoda melanoleuca ENSAMEG00000008199 I 0.725
SMRZ_0002528201 Schistosoma margrebowiei SMRZ_0002528201 I 0.725
ENSTGUG00000002359 Taeniopygia guttata ENSTGUG00000002359 I 0.725
ENSETEG00000009874 Echinops telfairi ENSETEG00000009874 I 0.725
MEIS3 Homo sapiens ENSG00000105419 D 0.725
ENSNLEG00000003031 Nomascus leucogenys ENSNLEG00000003031 I 0.725
MEIS3 Procavia capensis ENSPCAG00000016512 I 0.725
MEIS3 Pteropus vampyrus ENSPVAG00000004023 I 0.725
Sjc_0088150 Schistosoma japonicum Sjc_0088150 I 0.725
MESCA005372 Megaselia scalaris MESCA005372 I 0.725
Smp_147790 Schistosoma mansoni Smp_147790 I 0.725
MEIS3 Pan troglodytes ENSPTRG00000011208 I 0.725
HHAL007363-PA Halyomorpha halys HHAL007363-PA I 0.723
MEIS3 Tursiops truncatus ENSTTRG00000002278 I 0.723
MhA1_Contig274.frz3.gene11 Meloidogyne hapla MhA1_Contig274.frz3.gene11 I 0.721
Alligator_sinensis_CCG019581.1 Alligator sinensis Alligator_sinensis_CCG019581.1 I 0.721
unc-62 Caenorhabditis elegans WBGene00006796 D 0.721
ASIM_0001141701 Anisakis simplex ASIM_0001141701 I 0.718
TsM_001128900 Taenia solium TsM_001128900 I 0.713
HNAJ_0001355001 Hymenolepis nana HNAJ_0001355001 I 0.713
ISCW011271 Ixodes scapularis ISCW011271 I 0.713
pknox1.2 Danio rerio ENSDARG00000036542 I 0.713
Ogr07386 Ophisaurus gracilis Ogr07386 I 0.713
Sjc_0049050 Schistosoma japonicum Sjc_0049050 I 0.713
T265_13413 Opisthorchis viverrini T265_13413 I 0.713
Alligator_sinensis_CCG016844.1 Alligator sinensis Alligator_sinensis_CCG016844.1 I 0.713
pknox1.2 Oryzias latipes ENSORLG00000020833 I 0.713
Myotis_brandtii_PKNOX1_10016558 Myotis brandtii Myotis_brandtii_PKNOX1_10016558 I 0.713
PaG_02045 Pseudozyma aphidis PaG_02045 I 0.712
PFL1_06120 Pseudozyma flocculosa PFL1_06120 I 0.712
UHOR_00760 Ustilago hordei UHOR_00760 I 0.712
NAPIS_ORF00602 Nosema apis NAPIS_ORF00602 I 0.712
SCUD_0000036001 Schistosoma curassoni SCUD_0000036001 I 0.712
OFLC_0001361601 Onchocerca flexuosa OFLC_0001361601 I 0.712
A_02308 Schistosoma haematobium A_02308 I 0.712
UM00489 Ustilago maydis UM00489 I 0.710
PHSY_000883 Pseudozyma hubeiensis PHSY_000883 I 0.710
sr10177.2 Sporisorium reilianum sr10177.2 I 0.710
ENSEEUG00000012324 Erinaceus europaeus ENSEEUG00000012324 I 0.707
ENSOCUG00000027741 Oryctolagus cuniculus ENSOCUG00000027741 I 0.700
HDID_0001012401 Hymenolepis diminuta HDID_0001012401 I 0.699
ECANG7_02844 Echinococcus canadensis ECANG7_02844 I 0.699
EmuJ_000903300 Echinococcus multilocularis EmuJ_000903300 I 0.699
HmN_000588700 Hymenolepis microstoma HmN_000588700 I 0.699
MCOS_0000961001 Mesocestoides corti MCOS_0000961001 I 0.699
SPER_0002811001 Spirometra erinaceieuropaei SPER_0002811001 I 0.699
SPER_0003054301 Spirometra erinaceieuropaei SPER_0003054301 I 0.699
TsM_001060900 Taenia solium TsM_001060900 I 0.699
SSLN_0000616201 Schistocephalus solidus SSLN_0000616201 I 0.699
TASK_0000172901 Taenia asiatica TASK_0000172901 I 0.699
TTAC_0000164401 Hydatigera taeniaeformis TTAC_0000164401 I 0.699
SPER_0002540301 Spirometra erinaceieuropaei SPER_0002540301 I 0.699
SROB_0002390501 Schistosoma rodhaini SROB_0002390501 I 0.692
A_04094 Schistosoma haematobium A_04094 I 0.691
SMU15015009 Schmidtea mediterranea SMU15015009 I 0.691
SMTD_0001019201 Schistosoma mattheei SMTD_0001019201 I 0.691
D915_03380 Fasciola hepatica D915_03380 I 0.691
SMRZ_0000594901 Schistosoma margrebowiei SMRZ_0000594901 I 0.691
csin100426 Clonorchis sinensis csin100426 I 0.691
T265_13466 Opisthorchis viverrini T265_13466 I 0.691
Sjc_0112890 Schistosoma japonicum Sjc_0112890 I 0.691
TRE_0000165201 Trichobilharzia regenti TRE_0000165201 I 0.691
Smp_146580 Schistosoma mansoni Smp_146580 I 0.691
PXEA_0001804101 Protopolystoma xenopodis PXEA_0001804101 I 0.691
SCUD_0001480501 Schistosoma curassoni SCUD_0001480501 I 0.691
NCAS_0D03570 Naumovozyma castellii NCAS_0D03570 I 0.690
AMAG_20076 Allomyces macrogynus AMAG_20076 I 0.669
PSEUBRA_SCAF3g03946 Pseudozyma brasiliensis PSEUBRA_SCAF3g03946 I 0.665
SMU15027772 Schmidtea mediterranea SMU15027772 I 0.659
Q5EVH4_OIKDI Oikopleura dioica Q5EVH4_OIKDI D 0.659
pknox1.2 Takifugu rubripes ENSTRUG00000001997 I 0.659
GM20354 Drosophila sechellia FBgn0175237 I 0.658
PDK_20s1378761g001 Phoenix dactylifera PDK_20s1378761g001 I 0.656
PGTG_00378 Puccinia graminis PGTG_00378 I 0.653
PTTG_07356 Puccinia triticina PTTG_07356 I 0.653
ASU_08145 Ascaris suum ASU_08145 I 0.653
YQE_11947 Dendroctonus ponderosae YQE_11947 I 0.651
PTSG_05049 Salpingoeca rosetta PTSG_05049 I 0.649
MELLADRAFT_86714 Melampsora laricipopulina MELLADRAFT_86714 I 0.649
Ciclev10014094m.g Citrus clementina Ciclev10014094m.g I 0.648
ENSTSYG00000013512 Tarsius syrichta ENSTSYG00000013512 I 0.646
ENSCJAG00000033917 Callithrix jacchus ENSCJAG00000033917 I 0.645
ENSNLEG00000002908 Nomascus leucogenys ENSNLEG00000002908 I 0.645
ENSSTOG00000026042 Ictidomys tridecemlineatus ENSSTOG00000026042 I 0.645
SELMODRAFT_451273 Selaginella moellendorffii SELMODRAFT_451273 I 0.642
M413DRAFT_23455 Hebeloma cylindrosporum M413DRAFT_23455 I 0.640
CC1G_02962 Coprinopsis cinerea CC1G_02962 I 0.639
GSMUA_Achr2G06410_001 Musa acuminata GSMUA_Achr2G06410_001 I 0.636
gw1.16.163.1 Naegleria gruberi gw1.16.163.1 I 0.636
GSMUA_Achr2G06420_001 Musa acuminata GSMUA_Achr2G06420_001 I 0.636
PredSwiss_CON3072.2 Pneumocystis carinii PredSwiss_CON3072.2 I 0.635
PredSwiss_ASS2010_4395.1 Pneumocystis carinii PredSwiss_ASS2010_4395.1 I 0.635
cassava45286.m1 Manihot esculenta cassava45286.m1 I 0.634
BRADI3G26690 Brachypodium distachyon BRADI3G26690 I 0.630
OLONG_016590 Oryza longistaminata OLONG_016590 I 0.630
PDK_20s1302101g001 Phoenix dactylifera PDK_20s1302101g001 I 0.630
SMUV_0000922601 Syphacia muris SMUV_0000922601 I 0.627
Ciclev10008821m.g Citrus clementina Ciclev10008821m.g I 0.625
orange1.1g019151m.g Citrus sinensis orange1.1g019151m.g I 0.625
Lus10033192.g Linum usitatissimum Lus10033192.g I 0.624
Bra003753 Brassica rapa Bra003753 I 0.624
Aquca_007_00310 Aquilegia coerulea Aquca_007_00310 I 0.624
Lus10010633.g Linum usitatissimum Lus10010633.g I 0.624
Bo8g068630 Brassica oleracea Bo8g068630 I 0.624
Lus10042102.g Linum usitatissimum Lus10042102.g I 0.621
MDP0000222097 Malus domestica MDP0000222097 I 0.621
Bostr.10273s0307 Boechera stricta Bostr.10273s0307 I 0.621
Gorai.008G296800 Gossypium raimondii Gorai.008G296800 I 0.621
Traes_4BS_1DACC49DE Triticum aestivum Traes_4BS_1DACC49DE I 0.621
Traes_4DS_F05E51AD8 Triticum aestivum Traes_4DS_F05E51AD8 I 0.621
evm.TU.supercontig_254.5 Carica papaya evm.TU.supercontig_254.5 I 0.621
Lus10001238.g Linum usitatissimum Lus10001238.g I 0.621
Traes_4AL_6E51971E7 Triticum aestivum Traes_4AL_6E51971E7 I 0.621
MDP0000285490 Malus domestica MDP0000285490 I 0.621
OMERI03G25470 Oryza meridionalis OMERI03G25470 I 0.621
PDK_20s1306711g002 Phoenix dactylifera PDK_20s1306711g002 I 0.621
OPUNC03G26670 Oryza punctata OPUNC03G26670 I 0.621
ORUFI03G30320 Oryza rufipogon ORUFI03G30320 I 0.621
ONIVA03G30380 Oryza nivara ONIVA03G30380 I 0.621
PDK_20s1390681g001 Phoenix dactylifera PDK_20s1390681g001 I 0.621
GSMUA_Achr11G05110_001 Musa acuminata GSMUA_Achr11G05110_001 I 0.621
GSMUA_Achr2G00410_001 Musa acuminata GSMUA_Achr2G00410_001 I 0.621
OB03G36610 Oryza brachyantha OB03G36610 I 0.621
OS03G0673500 Oryza sativa OS03G0673500 I 0.621
GSMUA_Achr8G10550_001 Musa acuminata GSMUA_Achr8G10550_001 I 0.621
evm.TU.supercontig_99.9 Carica papaya evm.TU.supercontig_99.9 I 0.620
PRUPE_ppa008432mg Prunus persica PRUPE_ppa008432mg I 0.619
BGIOSGA010071 Oryza indica BGIOSGA010071 I 0.619
MDP0000131500 Malus domestica MDP0000131500 I 0.619
OBART03G29180 Oryza barthii OBART03G29180 I 0.619
MDP0000187050 Malus domestica MDP0000187050 I 0.619
MDP0000244941 Malus domestica MDP0000244941 I 0.619
POPTR_0013s01000 Populus trichocarpa POPTR_0013s01000 I 0.619
cassava15025.m1 Manihot esculenta cassava15025.m1 I 0.619
Pm003159 Prunus mume Pm003159 I 0.619
Solyc01g100510.2 Solanum lycopersicum Solyc01g100510.2 I 0.619
SapurV1A.0088s0320 Salix purpurea SapurV1A.0088s0320 I 0.619
OGLUM03G29400 Oryza glumaepatula OGLUM03G29400 I 0.619
SapurV1A.0606s0090 Salix purpurea SapurV1A.0606s0090 I 0.619
Gorai.013G129400 Gossypium raimondii Gorai.013G129400 I 0.619
POPTR_0005s01720 Populus trichocarpa POPTR_0005s01720 I 0.619
Gorai.007G306500 Gossypium raimondii Gorai.007G306500 I 0.619
Eucgr.H03292 Eucalyptus grandis Eucgr.H03292 I 0.619
PGSC0003DMG400002769 Solanum tuberosum PGSC0003DMG400002769 I 0.619
Bo8g069720 Brassica oleracea Bo8g069720 I 0.616
ORUFI03G37080 Oryza rufipogon ORUFI03G37080 I 0.616
Gorai.009G082700 Gossypium raimondii Gorai.009G082700 I 0.614
orange1.1g012938m.g Citrus sinensis orange1.1g012938m.g I 0.614
GRMZM2G074645 Zea mays GRMZM2G074645 I 0.614
Bostr.28794s0018 Boechera stricta Bostr.28794s0018 I 0.614
GRMZM2G125976 Zea mays GRMZM2G125976 I 0.614
GLYMA02G43761 Glycine max GLYMA02G43761 I 0.614
Ciclev10001116m.g Citrus clementina Ciclev10001116m.g I 0.614
Bra009826 Brassica rapa Bra009826 I 0.614
GSMUA_Achr10G22520_001 Musa acuminata GSMUA_Achr10G22520_001 I 0.614
CC1G_01828 Coprinopsis cinerea CC1G_01828 I 0.614
BGIOSGA019968 Oryza indica BGIOSGA019968 I 0.614
CC1G_01831 Coprinopsis cinerea CC1G_01831 I 0.614
Lus10021270.g Linum usitatissimum Lus10021270.g I 0.614
GSMUA_Achr4G14670_001 Musa acuminata GSMUA_Achr4G14670_001 I 0.614
SapurV1A.0119s0060 Salix purpurea SapurV1A.0119s0060 I 0.614
PDK_20s1610891g002 Phoenix dactylifera PDK_20s1610891g002 I 0.614
Traes_7AS_FED21D983 Triticum aestivum Traes_7AS_FED21D983 I 0.614
SapurV1A.0049s0270 Salix purpurea SapurV1A.0049s0270 I 0.614
Sb09g022270 Sorghum bicolor Sb09g022270 I 0.614
Si021626m.g Setaria italica Si021626m.g I 0.614
POPTR_0003s13120 Populus trichocarpa POPTR_0003s13120 I 0.614
Traes_1DL_2C7481DB3 Triticum aestivum Traes_1DL_2C7481DB3 I 0.614
Traes_3AL_8260356E3 Triticum aestivum Traes_3AL_8260356E3 I 0.614
Pavir.J37847 Panicum virgatum Pavir.J37847 I 0.614
OBART11G03800 Oryza barthii OBART11G03800 I 0.614
GSMUA_Achr7G27440_001 Musa acuminata GSMUA_Achr7G27440_001 I 0.614
AMTR_s00001p00262320 Amborella trichopoda AMTR_s00001p00262320 I 0.614
Pavir.Ea03389 Panicum virgatum Pavir.Ea03389 I 0.614
GSMUA_Achr4G07450_001 Musa acuminata GSMUA_Achr4G07450_001 I 0.614
Cla018214 Citrullus lanatus Cla018214 I 0.614
Pavir.J02888 Panicum virgatum Pavir.J02888 I 0.614
Pavir.J04807 Panicum virgatum Pavir.J04807 I 0.614
POPTR_0009s01530 Populus trichocarpa POPTR_0009s01530 I 0.614
MTR_7g065050 Medicago truncatula MTR_7g065050 I 0.614
POPTR_0016s07040 Populus trichocarpa POPTR_0016s07040 I 0.614
Pavir.Ib04220 Panicum virgatum Pavir.Ib04220 I 0.613
Pavir.Ia00979 Panicum virgatum Pavir.Ia00979 I 0.613
Lus10021452.g Linum usitatissimum Lus10021452.g I 0.613
Lus10016110.g Linum usitatissimum Lus10016110.g I 0.613
Solyc04g080780.2 Solanum lycopersicum Solyc04g080780.2 I 0.613
OMERI06G00490 Oryza meridionalis OMERI06G00490 I 0.613
OMERI03G25970 Oryza meridionalis OMERI03G25970 I 0.613
OLONG_026942 Oryza longistaminata OLONG_026942 I 0.613
OGLUM03G29920 Oryza glumaepatula OGLUM03G29920 I 0.613
OPUNC06G00480 Oryza punctata OPUNC06G00480 I 0.613
ORGLA03G0273800 Oryza glaberrima ORGLA03G0273800 I 0.613
Sb01g011970 Sorghum bicolor Sb01g011970 I 0.613
OS03G0680700 Oryza sativa OS03G0680700 I 0.613
ORUFI03G30870 Oryza rufipogon ORUFI03G30870 I 0.613
OB06G10590 Oryza brachyantha OB06G10590 I 0.613
GRMZM2G163761 Zea mays GRMZM2G163761 I 0.613
Bo3g001690 Brassica oleracea Bo3g001690 I 0.613
BGIOSGA010052 Oryza indica BGIOSGA010052 I 0.613
BLH8 Arabidopsis thaliana AT2G27990 I 0.613
BLH7 Arabidopsis thaliana AT2G16400 I 0.613
Bra005703 Brassica rapa Bra005703 I 0.613
BLH7 Arabidopsis lyrata fgenesh2_kg.3__3505__AT2G16400.1 I 0.613
GLYMA06G01186 Glycine max GLYMA06G01186 I 0.613
GLYMA04G05361 Glycine max GLYMA04G05361 I 0.613
GALMADRAFT_234328 Galerina marginata GALMADRAFT_234328 I 0.613
Si036329m.g Setaria italica Si036329m.g I 0.613
ONIVA03G30930 Oryza nivara ONIVA03G30930 I 0.613
Bostr.18351s0104 Boechera stricta Bostr.18351s0104 I 0.613
Cagra.0808s0012 Capsella grandiflora Cagra.0808s0012 I 0.613
Carubv10013548m.g Capsella rubella Carubv10013548m.g I 0.613
Carubv10024860m.g Capsella rubella Carubv10024860m.g I 0.613
Cagra.1360s0005 Capsella grandiflora Cagra.1360s0005 I 0.613
Bostr.27991s0131 Boechera stricta Bostr.27991s0131 I 0.613
Bostr.6251s0069 Boechera stricta Bostr.6251s0069 I 0.612
Bra028883 Brassica rapa Bra028883 I 0.612
Bra009618 Brassica rapa Bra009618 I 0.612
Bo9g184860 Brassica oleracea Bo9g184860 I 0.612
Carubv10000448m.g Capsella rubella Carubv10000448m.g I 0.612
Bo2g002450 Brassica oleracea Bo2g002450 I 0.612
BLH9 Arabidopsis thaliana AT5G02030 I 0.612
Cagra.2637s0010 Capsella grandiflora Cagra.2637s0010 I 0.612
Thhalv10012876m.g Eutrema salsugineum Thhalv10012876m.g I 0.612
LSN Arabidopsis lyrata fgenesh2_kg.6__114__AT5G02030.1 I 0.612
Pavir.J02443 Panicum virgatum Pavir.J02443 I 0.610
Traes_4DS_71AA74F78 Triticum aestivum Traes_4DS_71AA74F78 I 0.609
Traes_4BS_E0FC47132 Triticum aestivum Traes_4BS_E0FC47132 I 0.609
PGSC0003DMG400004953 Solanum tuberosum PGSC0003DMG400004953 I 0.609
BGIOSGA009880 Oryza indica BGIOSGA009880 I 0.609
MDP0000233192 Malus domestica MDP0000233192 I 0.609
OLONG_002512 Oryza longistaminata OLONG_002512 I 0.609
Bo7g018650 Brassica oleracea Bo7g018650 I 0.609
F775_16037 Aegilops tauschii F775_16037 I 0.608
MLOC_66099 Hordeum vulgare MLOC_66099 I 0.608
BLH4 Arabidopsis thaliana AT2G23760 I 0.607
gene20865-v1.0-hybrid Fragaria vesca gene20865-v1.0-hybrid I 0.604
29676.m001705 Ricinus communis 29676.m001705 I 0.603
Gorai.004G139300 Gossypium raimondii Gorai.004G139300 I 0.603
SPRG_07668 Saprolegnia parasitica SPRG_07668 I 0.600
evm.TU.supercontig_56.56 Carica papaya evm.TU.supercontig_56.56 I 0.600
Bo1g008580 Brassica oleracea Bo1g008580 I 0.600
F775_17983 Aegilops tauschii F775_17983 I 0.600
GSMUA_Achr8G05110_001 Musa acuminata GSMUA_Achr8G05110_001 I 0.600
TRIUR3_30726 Triticum urartu TRIUR3_30726 I 0.600
V565_053720 Rhizoctonia solani V565_053720 I 0.600
Ca_25877 Cicer arietinum Ca_25877 I 0.600
TRIUR3_16344 Triticum urartu TRIUR3_16344 I 0.600
Traes_7BL_7E32A8329 Triticum aestivum Traes_7BL_7E32A8329 I 0.600
Traes_4AL_405CA738F Triticum aestivum Traes_4AL_405CA738F I 0.600
Traes_1BL_0E29B6971 Triticum aestivum Traes_1BL_0E29B6971 I 0.600
OPUNC10G15240 Oryza punctata OPUNC10G15240 I 0.600
ONIVA10G18590 Oryza nivara ONIVA10G18590 I 0.600
MLOC_73862 Hordeum vulgare MLOC_73862 I 0.600
GSMUA_Achr5G03140_001 Musa acuminata GSMUA_Achr5G03140_001 I 0.600
OB02G18330 Oryza brachyantha OB02G18330 I 0.600
OGLUM10G16890 Oryza glumaepatula OGLUM10G16890 I 0.600
Ca_26497 Cicer arietinum Ca_26497 I 0.600
cassava41616.m1 Manihot esculenta cassava41616.m1 I 0.600
GRMZM2G064466 Zea mays GRMZM2G064466 I 0.600