NEMVEDRAFT_v1g92436 (Nematostella vectensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 NEMVEDRAFT_v1g92436 T221097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DUXA
M01247_2.00 		Homo sapiens
NTGATTRNN
NNYAATCAN		 PBM
Lambert et al.(2019)
pTH11226 		0.643 0.504
DUXA
M03244_2.00 		Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN		 SELEX
Jolma et al.(2013)
DUXA_1 		0.643 0.504
DUXA
M05402_2.00 		Homo sapiens
TRAYBYAATCA
TGATTRVRTYA		 SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX 		0.643 0.504
DUXA
M10756_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DUXA_02 		0.643 0.504
DUXA
M05403_2.00 		Homo sapiens
YRAYBYAATCA
TGATTRVRTYR		 SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX 		0.643 0.504
DUX4
M08135_2.00 		Homo sapiens
TAAYYYAATCA
TGATTRRRTTA		 ChIP-seq
Mathelier et al.(2014)
MA0468.1 		0.629 0.514
DUX4
M09167_2.00 		Homo sapiens
TAAYYYAATCA
TGATTRRRTTA		 Misc
Kulakovskiy et al.(2013)
DUX4_HUMAN.H11MO.0.A 		0.629 0.514
DUX4
M10757_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DUX4_01 		0.629 0.514
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDO45301 Homeodomain 15 71
EDO45301 Homeodomain 91 144

Links

Other Homeodomain family TFs
Other Nematostella vectensis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I 0.867
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I 0.851
DUXA Canis familiaris ENSCAFG00000002431 I 0.662
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I 0.651
DUXA Macaca mulatta ENSMMUG00000007788 I 0.651
ENSMMUP00000010232 Macaca fascicularis ENSMMUP00000010232 I 0.651
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I 0.651
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I 0.648
DUXA Gorilla gorilla ENSGGOG00000005650 I 0.643
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I 0.643
DUXA Homo sapiens ENSG00000258873 D 0.643
DUXA Pan troglodytes ENSPTRG00000028871 I 0.643
DUXA Equus caballus ENSECAG00000021112 I 0.643
ENSDNOG00000046863 Dasypus novemcinctus ENSDNOG00000046863 I 0.642
ENSDNOG00000025505 Dasypus novemcinctus ENSDNOG00000025505 I 0.642
ENSMICG00000015060 Microcebus murinus ENSMICG00000015060 I 0.639
ENSMICG00000006881 Microcebus murinus ENSMICG00000006881 I 0.639
DUXA Felis catus ENSFCAG00000007545 I 0.638
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I 0.637
DUXA Microcebus murinus ENSMICG00000006042 I 0.632
DUX4 Homo sapiens ENSG00000260596 D 0.629
ENSGGOG00000023520 Gorilla gorilla ENSGGOG00000023520 I 0.629
ENSMMUG00000014712 Macaca mulatta ENSMMUG00000014712 I 0.629
ENSMMUG00000017616 Macaca mulatta ENSMMUG00000017616 I 0.629
ENSMMUG00000016525 Macaca mulatta ENSMMUG00000016525 I 0.628
DUXA Tursiops truncatus ENSTTRG00000014200 I 0.626
ENSPPYG00000015280 Pongo abelii ENSPPYG00000015280 I 0.623
ENSCSAG00000019478 Chlorocebus sabaeus ENSCSAG00000019478 I 0.619
DUXA Loxodonta africana ENSLAFG00000030167 I 0.615
DUXA Oryctolagus cuniculus ENSOCUG00000011331 I 0.614
ENSNLEG00000016146 Nomascus leucogenys ENSNLEG00000016146 I 0.611
ENSDNOG00000033746 Dasypus novemcinctus ENSDNOG00000033746 I 0.605
ENSMMUP00000019302 Macaca fascicularis ENSMMUP00000019302 I 0.603
ENSCJAG00000023408 Callithrix jacchus ENSCJAG00000023408 I 0.601