CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ppa-ceh-28
(
Pristionchus pacificus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PPA19627
T222639_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA19627
Homeodomain
114
159
RKPRVLFTHEQVAELEERFTRQRYVSAAEREELASKLTLTATQIFA
Links
Other
Homeodomain
family TFs
Other
Pristionchus pacificus
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold28-EXSNAP2012.55
Pristionchus exspectatus
scaffold28-EXSNAP2012.55
N
0.867
GPUH_0000280301
Gongylonema pulchrum
GPUH_0000280301
N
0.805
MhA1_Contig1149.frz3.gene7
Meloidogyne hapla
MhA1_Contig1149.frz3.gene7
N
0.768
scro
Drosophila melanogaster
FBgn0028993
D
0.756
AFAF019448
Anopheles farauti
AFAF019448
N
0.751
AMEM018396
Anopheles merus
AMEM018396
N
0.751
YQE_02582
Dendroctonus ponderosae
YQE_02582
N
0.751
ASTEI04298
Anopheles stephensi
ASTEI04298
N
0.751
AATE015248
Anopheles atroparvus
AATE015248
N
0.751
AALB003620
Anopheles albimanus
AALB003620
N
0.751
Hsal_00498--XP_394578.2_APIME
Harpegnathos saltator
Hsal_00498--XP_394578.2_APIME
N
0.751
CLEC007188
Cimex lectularius
CLEC007188
N
0.751
ACEP14712
Atta cephalotes
ACEP14712
N
0.751
NECAME_06897
Necator americanus
NECAME_06897
N
0.751
SINV24463
Solenopsis invicta
SINV24463
N
0.751
BGIBMGA000762
Bombyx mori
BGIBMGA000762
N
0.751
ANCDUO_22746
Ancylostoma duodenale
ANCDUO_22746
N
0.751
CGOC_0001416801
Cylicostephanus goldi
CGOC_0001416801
N
0.751
ANCCEY_11186
Ancylostoma ceylanicum
ANCCEY_11186
N
0.751
Ogr05812
Ophisaurus gracilis
Ogr05812
N
0.751
Sjc_0057900
Schistosoma japonicum
Sjc_0057900
N
0.750
PXEA_0000454701
Protopolystoma xenopodis
PXEA_0000454701
N
0.750
ISCW011755
Ixodes scapularis
ISCW011755
N
0.734
L892_g18619
Steinernema scapterisci
L892_g18619
N
0.731
LDEC004800
Leptinotarsa decemlineata
LDEC004800
N
0.722
D915_09728
Fasciola hepatica
D915_09728
N
0.717
nkx2-4
Xenopus tropicalis
XB-GENE-487481
I
0.717
ACYPI007360
Acyrthosiphon pisum
ACYPI007360
N
0.711
ACYPI061631
Acyrthosiphon pisum
ACYPI061631
N
0.711
NKX2-6
Tupaia belangeri
ENSTBEG00000017101
N
0.709
nRc.2.0.1.g41491
Romanomermis culicivorax
nRc.2.0.1.g41491
N
0.709
CGI_10013606
Crassostrea gigas
CGI_10013606
N
0.707
SPER_0003264001
Spirometra erinaceieuropaei
SPER_0003264001
N
0.704
Ocbimv22011232m.g
Octopus bimaculoides
Ocbimv22011232m.g
N
0.704
SPER_0003336701
Spirometra erinaceieuropaei
SPER_0003336701
N
0.704
D915_05478
Fasciola hepatica
D915_05478
N
0.703
MhA1_Contig1424.frz3.gene2
Meloidogyne hapla
MhA1_Contig1424.frz3.gene2
N
0.698
MCOS_0000074401
Mesocestoides corti
MCOS_0000074401
N
0.688
CBG11788
Caenorhabditis briggsae
CBG11788
N
0.684
SSLN_0001021301
Schistocephalus solidus
SSLN_0001021301
I
0.680
DILT_0001226501
Diphyllobothrium latum
DILT_0001226501
I
0.680
HNAJ_0000742201
Hymenolepis nana
HNAJ_0000742201
N
0.675
HmN_000683200
Hymenolepis microstoma
HmN_000683200
N
0.675
Hba_18080
Heterorhabditis bacteriophora
Hba_18080
N
0.666
PXEA_0003338501
Protopolystoma xenopodis
PXEA_0003338501
N
0.657
Ogr00063
Ophisaurus gracilis
Ogr00063
I
0.655
SPU_019656
Strongylocentrotus purpuratus
SPU_019656
N
0.655
Gfo_R001743
Geospiza fortis
Gfo_R001743
N
0.655
Gfo_R001742
Geospiza fortis
Gfo_R001742
N
0.655
Tal_R010537
Tyto alba
Tal_R010537
N
0.655
Tal_R010536
Tyto alba
Tal_R010536
N
0.655
Myotis_brandtii_SLC6A7_10034750
Myotis brandtii
Myotis_brandtii_SLC6A7_10034750
I
0.655
Cmyd_10018206
Chelonia mydas
Cmyd_10018206
N
0.655
Cmyd_10006636
Chelonia mydas
Cmyd_10006636
N
0.655
Afo_R004423
Aptenodytes forsteri
Afo_R004423
N
0.655
Brh_R009090
Buceros rhinoceros
Brh_R009090
N
0.655
Afo_R004424
Aptenodytes forsteri
Afo_R004424
N
0.655
Brh_R009091
Buceros rhinoceros
Brh_R009091
N
0.655
ENSGMOG00000004079
Gadus morhua
ENSGMOG00000004079
N
0.654
CBG27683
Caenorhabditis briggsae
CBG27683
N
0.651
SPER_0003017401
Spirometra erinaceieuropaei
SPER_0003017401
N
0.650
SPER_0002786601
Spirometra erinaceieuropaei
SPER_0002786601
N
0.650
DILT_0000246201
Diphyllobothrium latum
DILT_0000246201
N
0.650
AMAM017394
Anopheles maculatus
AMAM017394
N
0.650
SNAPOd2T00004995001
Oikopleura dioica
SNAPOd2T00004995001
N
0.649
PXEA_0002847001
Protopolystoma xenopodis
PXEA_0002847001
N
0.645
ENSECAG00000023678
Equus caballus
ENSECAG00000023678
I
0.636
TsM_000851900
Taenia solium
TsM_000851900
N
0.635
ENSLOCG00000004278
Lepisosteus oculatus
ENSLOCG00000004278
N
0.629
F775_52178
Aegilops tauschii
F775_52178
N
0.629
D918_02763
Trichuris suis
D918_02763
N
0.621
SPER_0000113901
Spirometra erinaceieuropaei
SPER_0000113901
N
0.612
SPER_0000700401
Spirometra erinaceieuropaei
SPER_0000700401
N
0.612
DILT_0000804401
Diphyllobothrium latum
DILT_0000804401
N
0.612
e_gw.543.9.1
Branchiostoma floridae
e_gw.543.9.1
N
0.608
e_gw.85.119.1
Branchiostoma floridae
e_gw.85.119.1
N
0.608
PXEA_0001780701
Protopolystoma xenopodis
PXEA_0001780701
N
0.607